Protein–RNA interactions for Protein: Q9H322

VCX2, Variable charge X-linked protein 2, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX2Q9H322 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX2Q9H322 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX2Q9H322 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX2Q9H322 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX2Q9H322 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VCX2Q9H322 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
VCX2Q9H322 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX2Q9H322 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX2Q9H322 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VCX2Q9H322 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX2Q9H322 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX2Q9H322 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX2Q9H322 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX2Q9H322 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.64■□□□□ 0.41
VCX2Q9H322 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VCX2Q9H322 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.64■□□□□ 0.41
VCX2Q9H322 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX2Q9H322 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX2Q9H322 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX2Q9H322 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX2Q9H322 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX2Q9H322 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX2Q9H322 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX2Q9H322 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VCX2Q9H322 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX2Q9H322 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX2Q9H322 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX2Q9H322 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VCX2Q9H322 AC091060.1-201ENST00000623524 1766 ntBASIC17.61■□□□□ 0.41
VCX2Q9H322 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX2Q9H322 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.61■□□□□ 0.41
VCX2Q9H322 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX2Q9H322 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX2Q9H322 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX2Q9H322 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX2Q9H322 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX2Q9H322 AC127502.1-201ENST00000399971 1502 ntBASIC17.61■□□□□ 0.41
VCX2Q9H322 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.6■□□□□ 0.41
VCX2Q9H322 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX2Q9H322 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX2Q9H322 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX2Q9H322 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.59■□□□□ 0.41
VCX2Q9H322 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX2Q9H322 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX2Q9H322 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
VCX2Q9H322 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCX2Q9H322 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.58■□□□□ 0.41
VCX2Q9H322 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCX2Q9H322 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCX2Q9H322 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCX2Q9H322 AC100797.4-201ENST00000631653 1827 ntBASIC17.58■□□□□ 0.4
VCX2Q9H322 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.58■□□□□ 0.4
VCX2Q9H322 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCX2Q9H322 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCX2Q9H322 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX2Q9H322 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCX2Q9H322 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX2Q9H322 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCX2Q9H322 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VCX2Q9H322 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VCX2Q9H322 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX2Q9H322 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
VCX2Q9H322 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.56■□□□□ 0.4
VCX2Q9H322 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VCX2Q9H322 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.56■□□□□ 0.4
VCX2Q9H322 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCX2Q9H322 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.55■□□□□ 0.4
VCX2Q9H322 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.55■□□□□ 0.4
VCX2Q9H322 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.55■□□□□ 0.4
VCX2Q9H322 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.55■□□□□ 0.4
VCX2Q9H322 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 AC145676.1-201ENST00000514988 2004 ntBASIC17.55■□□□□ 0.4
VCX2Q9H322 AP002414.2-202ENST00000590929 1450 ntBASIC17.55■□□□□ 0.4
VCX2Q9H322 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
VCX2Q9H322 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX2Q9H322 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VCX2Q9H322 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
VCX2Q9H322 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.54■□□□□ 0.4
VCX2Q9H322 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX2Q9H322 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX2Q9H322 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX2Q9H322 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.53■□□□□ 0.4
VCX2Q9H322 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.53■□□□□ 0.4
VCX2Q9H322 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms