Protein–RNA interactions for Protein: Q9ERE8

Tlnrd1, Talin rod domain-containing protein 1, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlnrd1Q9ERE8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlnrd1Q9ERE8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tlnrd1Q9ERE8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.31■□□□□ 0.68
Tlnrd1Q9ERE8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlnrd1Q9ERE8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlnrd1Q9ERE8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlnrd1Q9ERE8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tlnrd1Q9ERE8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlnrd1Q9ERE8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.3■□□□□ 0.68
Tlnrd1Q9ERE8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tlnrd1Q9ERE8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tlnrd1Q9ERE8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlnrd1Q9ERE8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlnrd1Q9ERE8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlnrd1Q9ERE8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tlnrd1Q9ERE8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.28■□□□□ 0.68
Tlnrd1Q9ERE8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.28■□□□□ 0.68
Tlnrd1Q9ERE8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlnrd1Q9ERE8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tlnrd1Q9ERE8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlnrd1Q9ERE8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlnrd1Q9ERE8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.26■□□□□ 0.67
Tlnrd1Q9ERE8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlnrd1Q9ERE8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tlnrd1Q9ERE8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlnrd1Q9ERE8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlnrd1Q9ERE8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlnrd1Q9ERE8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tlnrd1Q9ERE8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tlnrd1Q9ERE8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tlnrd1Q9ERE8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlnrd1Q9ERE8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlnrd1Q9ERE8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tlnrd1Q9ERE8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlnrd1Q9ERE8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlnrd1Q9ERE8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tlnrd1Q9ERE8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlnrd1Q9ERE8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Tlnrd1Q9ERE8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlnrd1Q9ERE8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlnrd1Q9ERE8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tlnrd1Q9ERE8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlnrd1Q9ERE8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tlnrd1Q9ERE8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlnrd1Q9ERE8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlnrd1Q9ERE8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.21■□□□□ 0.67
Tlnrd1Q9ERE8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tlnrd1Q9ERE8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tlnrd1Q9ERE8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlnrd1Q9ERE8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlnrd1Q9ERE8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlnrd1Q9ERE8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tlnrd1Q9ERE8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlnrd1Q9ERE8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlnrd1Q9ERE8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.19■□□□□ 0.66
Tlnrd1Q9ERE8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlnrd1Q9ERE8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.18■□□□□ 0.66
Tlnrd1Q9ERE8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tlnrd1Q9ERE8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlnrd1Q9ERE8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlnrd1Q9ERE8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tlnrd1Q9ERE8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlnrd1Q9ERE8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlnrd1Q9ERE8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Tlnrd1Q9ERE8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlnrd1Q9ERE8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.16■□□□□ 0.66
Tlnrd1Q9ERE8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlnrd1Q9ERE8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlnrd1Q9ERE8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tlnrd1Q9ERE8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Tlnrd1Q9ERE8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlnrd1Q9ERE8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlnrd1Q9ERE8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlnrd1Q9ERE8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlnrd1Q9ERE8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlnrd1Q9ERE8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlnrd1Q9ERE8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tlnrd1Q9ERE8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlnrd1Q9ERE8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlnrd1Q9ERE8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlnrd1Q9ERE8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlnrd1Q9ERE8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlnrd1Q9ERE8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlnrd1Q9ERE8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlnrd1Q9ERE8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlnrd1Q9ERE8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tlnrd1Q9ERE8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlnrd1Q9ERE8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Tlnrd1Q9ERE8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlnrd1Q9ERE8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlnrd1Q9ERE8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tlnrd1Q9ERE8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlnrd1Q9ERE8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms