Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl8cQ9D6I0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rtl8cQ9D6I0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.49■□□□□ 0.87
Rtl8cQ9D6I0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.49■□□□□ 0.87
Rtl8cQ9D6I0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl8cQ9D6I0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl8cQ9D6I0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl8cQ9D6I0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rtl8cQ9D6I0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl8cQ9D6I0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl8cQ9D6I0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rtl8cQ9D6I0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl8cQ9D6I0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl8cQ9D6I0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl8cQ9D6I0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl8cQ9D6I0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl8cQ9D6I0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl8cQ9D6I0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl8cQ9D6I0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
Rtl8cQ9D6I0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl8cQ9D6I0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl8cQ9D6I0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtl8cQ9D6I0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtl8cQ9D6I0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtl8cQ9D6I0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtl8cQ9D6I0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtl8cQ9D6I0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl8cQ9D6I0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl8cQ9D6I0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl8cQ9D6I0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Gm7432-201ENSMUST00000210343 879 ntBASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl8cQ9D6I0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtl8cQ9D6I0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtl8cQ9D6I0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.39■□□□□ 0.85
Rtl8cQ9D6I0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtl8cQ9D6I0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl8cQ9D6I0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl8cQ9D6I0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl8cQ9D6I0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl8cQ9D6I0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl8cQ9D6I0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.35■□□□□ 0.85
Rtl8cQ9D6I0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.35■□□□□ 0.85
Rtl8cQ9D6I0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl8cQ9D6I0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl8cQ9D6I0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl8cQ9D6I0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl8cQ9D6I0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl8cQ9D6I0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl8cQ9D6I0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl8cQ9D6I0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.33■□□□□ 0.85
Rtl8cQ9D6I0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rtl8cQ9D6I0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rtl8cQ9D6I0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtl8cQ9D6I0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtl8cQ9D6I0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.32■□□□□ 0.84
Rtl8cQ9D6I0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.32■□□□□ 0.84
Rtl8cQ9D6I0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.32■□□□□ 0.84
Rtl8cQ9D6I0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl8cQ9D6I0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.31■□□□□ 0.84
Rtl8cQ9D6I0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl8cQ9D6I0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl8cQ9D6I0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl8cQ9D6I0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms