Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
RTFDC1Q9BY42 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.14■■■□□ 2.58
RTFDC1Q9BY42 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RTFDC1Q9BY42 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.14■■■□□ 2.58
RTFDC1Q9BY42 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.57
RTFDC1Q9BY42 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
RTFDC1Q9BY42 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RTFDC1Q9BY42 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RTFDC1Q9BY42 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
RTFDC1Q9BY42 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
RTFDC1Q9BY42 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.11■■■□□ 2.57
RTFDC1Q9BY42 AC007029.1-201ENST00000604183 313 ntBASIC31.11■■■□□ 2.57
RTFDC1Q9BY42 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.1■■■□□ 2.57
RTFDC1Q9BY42 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.1■■■□□ 2.57
RTFDC1Q9BY42 AC129492.7-201ENST00000622992 756 ntBASIC31.09■■■□□ 2.57
RTFDC1Q9BY42 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.09■■■□□ 2.57
RTFDC1Q9BY42 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RTFDC1Q9BY42 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RTFDC1Q9BY42 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
RTFDC1Q9BY42 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RTFDC1Q9BY42 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.07■■■□□ 2.56
RTFDC1Q9BY42 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RTFDC1Q9BY42 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.06■■■□□ 2.56
RTFDC1Q9BY42 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.06■■■□□ 2.56
RTFDC1Q9BY42 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
RTFDC1Q9BY42 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
RTFDC1Q9BY42 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.05■■■□□ 2.56
RTFDC1Q9BY42 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RTFDC1Q9BY42 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.05■■■□□ 2.56
RTFDC1Q9BY42 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RTFDC1Q9BY42 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RTFDC1Q9BY42 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RTFDC1Q9BY42 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RTFDC1Q9BY42 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RTFDC1Q9BY42 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RTFDC1Q9BY42 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.04■■■□□ 2.56
RTFDC1Q9BY42 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.04■■■□□ 2.56
RTFDC1Q9BY42 AC009831.1-201ENST00000580420 1582 ntBASIC31.03■■■□□ 2.56
RTFDC1Q9BY42 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.02■■■□□ 2.56
RTFDC1Q9BY42 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RTFDC1Q9BY42 AL592293.1-201ENST00000502889 1188 ntBASIC31.02■■■□□ 2.56
RTFDC1Q9BY42 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
RTFDC1Q9BY42 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.01■■■□□ 2.55
RTFDC1Q9BY42 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
RTFDC1Q9BY42 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RTFDC1Q9BY42 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
RTFDC1Q9BY42 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31■■■□□ 2.55
RTFDC1Q9BY42 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31■■■□□ 2.55
RTFDC1Q9BY42 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RTFDC1Q9BY42 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RTFDC1Q9BY42 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
RTFDC1Q9BY42 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RTFDC1Q9BY42 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
RTFDC1Q9BY42 AP004833.2-201ENST00000532228 1454 ntBASIC30.99■■■□□ 2.55
RTFDC1Q9BY42 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
RTFDC1Q9BY42 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
RTFDC1Q9BY42 AC133552.2-201ENST00000619106 1032 ntBASIC30.98■■■□□ 2.55
RTFDC1Q9BY42 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RTFDC1Q9BY42 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.97■■■□□ 2.55
RTFDC1Q9BY42 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.97■■■□□ 2.55
RTFDC1Q9BY42 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RTFDC1Q9BY42 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
RTFDC1Q9BY42 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.96■■■□□ 2.55
RTFDC1Q9BY42 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.96■■■□□ 2.55
RTFDC1Q9BY42 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RTFDC1Q9BY42 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
RTFDC1Q9BY42 ST7-AS1-201ENST00000456775 1889 ntBASIC30.95■■■□□ 2.55
RTFDC1Q9BY42 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RTFDC1Q9BY42 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RTFDC1Q9BY42 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
RTFDC1Q9BY42 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RTFDC1Q9BY42 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RTFDC1Q9BY42 SMPD5-203ENST00000639008 1464 ntBASIC30.95■■■□□ 2.54
RTFDC1Q9BY42 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RTFDC1Q9BY42 DUX4L18-201ENST00000553347 1267 ntBASIC30.94■■■□□ 2.54
RTFDC1Q9BY42 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
RTFDC1Q9BY42 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RTFDC1Q9BY42 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RTFDC1Q9BY42 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RTFDC1Q9BY42 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RTFDC1Q9BY42 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.93■■■□□ 2.54
RTFDC1Q9BY42 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.93■■■□□ 2.54
RTFDC1Q9BY42 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RTFDC1Q9BY42 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
RTFDC1Q9BY42 AC026202.3-201ENST00000600805 1127 ntBASIC30.92■■■□□ 2.54
RTFDC1Q9BY42 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.92■■■□□ 2.54
RTFDC1Q9BY42 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
RTFDC1Q9BY42 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
RTFDC1Q9BY42 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.91■■■□□ 2.54
RTFDC1Q9BY42 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RTFDC1Q9BY42 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RTFDC1Q9BY42 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.9■■■□□ 2.54
RTFDC1Q9BY42 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
RTFDC1Q9BY42 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
RTFDC1Q9BY42 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
RTFDC1Q9BY42 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RTFDC1Q9BY42 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RTFDC1Q9BY42 AC025884.2-201ENST00000553429 711 ntBASIC30.89■■■□□ 2.54
RTFDC1Q9BY42 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.89■■■□□ 2.54
RTFDC1Q9BY42 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms