Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMC6Q96SB8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMC6Q96SB8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.31■■□□□ 1.64
SMC6Q96SB8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMC6Q96SB8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.31■■□□□ 1.64
SMC6Q96SB8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC6Q96SB8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC6Q96SB8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMC6Q96SB8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMC6Q96SB8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMC6Q96SB8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMC6Q96SB8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.3■■□□□ 1.64
SMC6Q96SB8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
SMC6Q96SB8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMC6Q96SB8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.28■■□□□ 1.64
SMC6Q96SB8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMC6Q96SB8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.27■■□□□ 1.64
SMC6Q96SB8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.27■■□□□ 1.64
SMC6Q96SB8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.27■■□□□ 1.64
SMC6Q96SB8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMC6Q96SB8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.26■■□□□ 1.63
SMC6Q96SB8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMC6Q96SB8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMC6Q96SB8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMC6Q96SB8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.25■■□□□ 1.63
SMC6Q96SB8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.25■■□□□ 1.63
SMC6Q96SB8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.25■■□□□ 1.63
SMC6Q96SB8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMC6Q96SB8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.25■■□□□ 1.63
SMC6Q96SB8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMC6Q96SB8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMC6Q96SB8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMC6Q96SB8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SMC6Q96SB8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMC6Q96SB8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SMC6Q96SB8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
SMC6Q96SB8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.23■■□□□ 1.63
SMC6Q96SB8 AC018358.1-201ENST00000631079 1402 ntBASIC25.23■■□□□ 1.63
SMC6Q96SB8 AC145676.1-201ENST00000514988 2004 ntBASIC25.23■■□□□ 1.63
SMC6Q96SB8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC6Q96SB8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC6Q96SB8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.22■■□□□ 1.63
SMC6Q96SB8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
SMC6Q96SB8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMC6Q96SB8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.2■■□□□ 1.63
SMC6Q96SB8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SMC6Q96SB8 SUZ12P1-203ENST00000578195 985 ntBASIC25.2■■□□□ 1.62
SMC6Q96SB8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.2■■□□□ 1.62
SMC6Q96SB8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
SMC6Q96SB8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMC6Q96SB8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMC6Q96SB8 AL391121.1-201ENST00000607967 1349 ntBASIC25.18■■□□□ 1.62
SMC6Q96SB8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.18■■□□□ 1.62
SMC6Q96SB8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
SMC6Q96SB8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMC6Q96SB8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMC6Q96SB8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC6Q96SB8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC6Q96SB8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC6Q96SB8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SMC6Q96SB8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
SMC6Q96SB8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
SMC6Q96SB8 AC020928.2-201ENST00000588717 2197 ntBASIC25.15■■□□□ 1.62
SMC6Q96SB8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC6Q96SB8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMC6Q96SB8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.15■■□□□ 1.62
SMC6Q96SB8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
SMC6Q96SB8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC6Q96SB8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.14■■□□□ 1.62
SMC6Q96SB8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.14■■□□□ 1.62
SMC6Q96SB8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SMC6Q96SB8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMC6Q96SB8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMC6Q96SB8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMC6Q96SB8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SMC6Q96SB8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.12■■□□□ 1.61
SMC6Q96SB8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.12■■□□□ 1.61
SMC6Q96SB8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.12■■□□□ 1.61
SMC6Q96SB8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMC6Q96SB8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SMC6Q96SB8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMC6Q96SB8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMC6Q96SB8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.11■■□□□ 1.61
SMC6Q96SB8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC6Q96SB8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC6Q96SB8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC6Q96SB8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SMC6Q96SB8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC6Q96SB8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC6Q96SB8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC6Q96SB8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC6Q96SB8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.1■■□□□ 1.61
SMC6Q96SB8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC6Q96SB8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC6Q96SB8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMC6Q96SB8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
SMC6Q96SB8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMC6Q96SB8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMC6Q96SB8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMC6Q96SB8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms