Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CNTNAP3BQ96NU0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CNTNAP3BQ96NU0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CNTNAP3BQ96NU0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CNTNAP3BQ96NU0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CNTNAP3BQ96NU0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.27■■□□□ 1.48
CNTNAP3BQ96NU0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CNTNAP3BQ96NU0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.26■■□□□ 1.47
CNTNAP3BQ96NU0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CNTNAP3BQ96NU0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CNTNAP3BQ96NU0 AC239859.2-201ENST00000444165 318 ntBASIC24.26■■□□□ 1.47
CNTNAP3BQ96NU0 PVT1_1.1-201ENST00000615125 194 ntBASIC24.26■■□□□ 1.47
CNTNAP3BQ96NU0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CNTNAP3BQ96NU0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.25■■□□□ 1.47
CNTNAP3BQ96NU0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CNTNAP3BQ96NU0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.24■■□□□ 1.47
CNTNAP3BQ96NU0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CNTNAP3BQ96NU0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CNTNAP3BQ96NU0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.23■■□□□ 1.47
CNTNAP3BQ96NU0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.23■■□□□ 1.47
CNTNAP3BQ96NU0 AL031848.2-201ENST00000607670 837 ntBASIC24.23■■□□□ 1.47
CNTNAP3BQ96NU0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
CNTNAP3BQ96NU0 MIR219A2-201ENST00000608502 1504 ntBASIC24.23■■□□□ 1.47
CNTNAP3BQ96NU0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CNTNAP3BQ96NU0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CNTNAP3BQ96NU0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.22■■□□□ 1.47
CNTNAP3BQ96NU0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.22■■□□□ 1.47
CNTNAP3BQ96NU0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CNTNAP3BQ96NU0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.21■■□□□ 1.47
CNTNAP3BQ96NU0 MIR4508-201ENST00000584178 70 ntBASIC24.21■■□□□ 1.47
CNTNAP3BQ96NU0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CNTNAP3BQ96NU0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.2■■□□□ 1.46
CNTNAP3BQ96NU0 MIR6765-201ENST00000614092 87 ntBASIC24.2■■□□□ 1.46
CNTNAP3BQ96NU0 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.19■■□□□ 1.46
CNTNAP3BQ96NU0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CNTNAP3BQ96NU0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CNTNAP3BQ96NU0 AL157400.5-201ENST00000507624 621 ntBASIC24.19■■□□□ 1.46
CNTNAP3BQ96NU0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CNTNAP3BQ96NU0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CNTNAP3BQ96NU0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.18■■□□□ 1.46
CNTNAP3BQ96NU0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.18■■□□□ 1.46
CNTNAP3BQ96NU0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CNTNAP3BQ96NU0 AC126177.7-201ENST00000547904 679 ntBASIC24.18■■□□□ 1.46
CNTNAP3BQ96NU0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
CNTNAP3BQ96NU0 AC103724.3-201ENST00000564481 992 ntBASIC24.18■■□□□ 1.46
CNTNAP3BQ96NU0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CNTNAP3BQ96NU0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CNTNAP3BQ96NU0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CNTNAP3BQ96NU0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CNTNAP3BQ96NU0 AC104564.3-201ENST00000582367 638 ntBASIC24.17■■□□□ 1.46
CNTNAP3BQ96NU0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CNTNAP3BQ96NU0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CNTNAP3BQ96NU0 RARRES2P6-201ENST00000567333 442 ntBASIC24.16■■□□□ 1.46
CNTNAP3BQ96NU0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CNTNAP3BQ96NU0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.15■■□□□ 1.46
CNTNAP3BQ96NU0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CNTNAP3BQ96NU0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNTNAP3BQ96NU0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNTNAP3BQ96NU0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.15■■□□□ 1.46
CNTNAP3BQ96NU0 AC026202.3-201ENST00000600805 1127 ntBASIC24.15■■□□□ 1.46
CNTNAP3BQ96NU0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CNTNAP3BQ96NU0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CNTNAP3BQ96NU0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CNTNAP3BQ96NU0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.14■■□□□ 1.45
CNTNAP3BQ96NU0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.14■■□□□ 1.45
CNTNAP3BQ96NU0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CNTNAP3BQ96NU0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CNTNAP3BQ96NU0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CNTNAP3BQ96NU0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CNTNAP3BQ96NU0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.13■■□□□ 1.45
CNTNAP3BQ96NU0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.12■■□□□ 1.45
CNTNAP3BQ96NU0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.12■■□□□ 1.45
CNTNAP3BQ96NU0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CNTNAP3BQ96NU0 SMPD5-203ENST00000639008 1464 ntBASIC24.12■■□□□ 1.45
CNTNAP3BQ96NU0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.11■■□□□ 1.45
CNTNAP3BQ96NU0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.11■■□□□ 1.45
CNTNAP3BQ96NU0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CNTNAP3BQ96NU0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CNTNAP3BQ96NU0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.1■■□□□ 1.45
CNTNAP3BQ96NU0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CNTNAP3BQ96NU0 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.1■■□□□ 1.45
CNTNAP3BQ96NU0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.1■■□□□ 1.45
CNTNAP3BQ96NU0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CNTNAP3BQ96NU0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNTNAP3BQ96NU0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
CNTNAP3BQ96NU0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CNTNAP3BQ96NU0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.09■■□□□ 1.45
CNTNAP3BQ96NU0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.09■■□□□ 1.45
CNTNAP3BQ96NU0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.09■■□□□ 1.45
CNTNAP3BQ96NU0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms