Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPG11Q96JI7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SPG11Q96JI7 AC009831.1-201ENST00000580420 1582 ntBASIC21.67■■□□□ 1.06
SPG11Q96JI7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPG11Q96JI7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPG11Q96JI7 AC007029.1-201ENST00000604183 313 ntBASIC21.67■■□□□ 1.06
SPG11Q96JI7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.66■■□□□ 1.06
SPG11Q96JI7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPG11Q96JI7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPG11Q96JI7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.66■■□□□ 1.06
SPG11Q96JI7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPG11Q96JI7 RAP2CP1-202ENST00000605179 643 ntBASIC21.65■■□□□ 1.06
SPG11Q96JI7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPG11Q96JI7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPG11Q96JI7 DUX4L9-201ENST00000449051 1259 ntBASIC21.65■■□□□ 1.06
SPG11Q96JI7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPG11Q96JI7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
SPG11Q96JI7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.64■■□□□ 1.06
SPG11Q96JI7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPG11Q96JI7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPG11Q96JI7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPG11Q96JI7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.63■■□□□ 1.05
SPG11Q96JI7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPG11Q96JI7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPG11Q96JI7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SPG11Q96JI7 AL592293.1-201ENST00000502889 1188 ntBASIC21.62■■□□□ 1.05
SPG11Q96JI7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPG11Q96JI7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPG11Q96JI7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.62■■□□□ 1.05
SPG11Q96JI7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPG11Q96JI7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SPG11Q96JI7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.61■■□□□ 1.05
SPG11Q96JI7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.61■■□□□ 1.05
SPG11Q96JI7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPG11Q96JI7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.61■■□□□ 1.05
SPG11Q96JI7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPG11Q96JI7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.6■■□□□ 1.05
SPG11Q96JI7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPG11Q96JI7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.6■■□□□ 1.05
SPG11Q96JI7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.6■■□□□ 1.05
SPG11Q96JI7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPG11Q96JI7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.59■■□□□ 1.05
SPG11Q96JI7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.59■■□□□ 1.05
SPG11Q96JI7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.58■■□□□ 1.05
SPG11Q96JI7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SPG11Q96JI7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPG11Q96JI7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.58■■□□□ 1.04
SPG11Q96JI7 AC126177.7-201ENST00000547904 679 ntBASIC21.58■■□□□ 1.04
SPG11Q96JI7 KRT8P33-201ENST00000508125 1423 ntBASIC21.57■■□□□ 1.04
SPG11Q96JI7 GUSBP5-201ENST00000418136 578 ntBASIC21.57■■□□□ 1.04
SPG11Q96JI7 RP9P-202ENST00000450133 1212 ntBASIC21.57■■□□□ 1.04
SPG11Q96JI7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SPG11Q96JI7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SPG11Q96JI7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SPG11Q96JI7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.57■■□□□ 1.04
SPG11Q96JI7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.57■■□□□ 1.04
SPG11Q96JI7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.57■■□□□ 1.04
SPG11Q96JI7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.56■■□□□ 1.04
SPG11Q96JI7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SPG11Q96JI7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPG11Q96JI7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPG11Q96JI7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPG11Q96JI7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPG11Q96JI7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.55■■□□□ 1.04
SPG11Q96JI7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.55■■□□□ 1.04
SPG11Q96JI7 AC010980.1-201ENST00000587192 1142 ntBASIC21.55■■□□□ 1.04
SPG11Q96JI7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPG11Q96JI7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPG11Q96JI7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.54■■□□□ 1.04
SPG11Q96JI7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPG11Q96JI7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPG11Q96JI7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPG11Q96JI7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SPG11Q96JI7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.53■■□□□ 1.04
SPG11Q96JI7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPG11Q96JI7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPG11Q96JI7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.53■■□□□ 1.04
SPG11Q96JI7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPG11Q96JI7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.53■■□□□ 1.04
SPG11Q96JI7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPG11Q96JI7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPG11Q96JI7 AC093536.1-201ENST00000569153 554 ntBASIC21.52■■□□□ 1.04
SPG11Q96JI7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPG11Q96JI7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPG11Q96JI7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SPG11Q96JI7 AC025884.2-201ENST00000553429 711 ntBASIC21.51■■□□□ 1.03
SPG11Q96JI7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPG11Q96JI7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPG11Q96JI7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPG11Q96JI7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPG11Q96JI7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.51■■□□□ 1.03
SPG11Q96JI7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.51■■□□□ 1.03
SPG11Q96JI7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPG11Q96JI7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPG11Q96JI7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPG11Q96JI7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.5■■□□□ 1.03
SPG11Q96JI7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPG11Q96JI7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SPG11Q96JI7 SMPD5-203ENST00000639008 1464 ntBASIC21.5■■□□□ 1.03
SPG11Q96JI7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms