Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
LRRC58Q96CX6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
LRRC58Q96CX6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC58Q96CX6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC58Q96CX6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC58Q96CX6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.89■■□□□ 1.42
LRRC58Q96CX6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.89■■□□□ 1.42
LRRC58Q96CX6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LRRC58Q96CX6 AC145676.1-201ENST00000514988 2004 ntBASIC23.88■■□□□ 1.41
LRRC58Q96CX6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.88■■□□□ 1.41
LRRC58Q96CX6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRRC58Q96CX6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.88■■□□□ 1.41
LRRC58Q96CX6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRRC58Q96CX6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC58Q96CX6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC58Q96CX6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC58Q96CX6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
LRRC58Q96CX6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRRC58Q96CX6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRRC58Q96CX6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.85■■□□□ 1.41
LRRC58Q96CX6 AC097358.2-201ENST00000607541 1159 ntBASIC23.85■■□□□ 1.41
LRRC58Q96CX6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.85■■□□□ 1.41
LRRC58Q96CX6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.84■■□□□ 1.41
LRRC58Q96CX6 MIR762-201ENST00000390236 83 ntBASIC23.84■■□□□ 1.41
LRRC58Q96CX6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRC58Q96CX6 WHAMMP2-203ENST00000563942 1603 ntBASIC23.83■■□□□ 1.41
LRRC58Q96CX6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LRRC58Q96CX6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC58Q96CX6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
LRRC58Q96CX6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRC58Q96CX6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRC58Q96CX6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRC58Q96CX6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC58Q96CX6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
LRRC58Q96CX6 AC020928.2-201ENST00000588717 2197 ntBASIC23.81■■□□□ 1.4
LRRC58Q96CX6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
LRRC58Q96CX6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC58Q96CX6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LRRC58Q96CX6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.8■■□□□ 1.4
LRRC58Q96CX6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC58Q96CX6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
LRRC58Q96CX6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.79■■□□□ 1.4
LRRC58Q96CX6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC58Q96CX6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.78■■□□□ 1.4
LRRC58Q96CX6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC58Q96CX6 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.78■■□□□ 1.4
LRRC58Q96CX6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC58Q96CX6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC58Q96CX6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC58Q96CX6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
LRRC58Q96CX6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC58Q96CX6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC58Q96CX6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC58Q96CX6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC58Q96CX6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC58Q96CX6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.76■■□□□ 1.39
LRRC58Q96CX6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC58Q96CX6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC58Q96CX6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC58Q96CX6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC58Q96CX6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
LRRC58Q96CX6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC58Q96CX6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC58Q96CX6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC58Q96CX6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC58Q96CX6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC58Q96CX6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC58Q96CX6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC58Q96CX6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC58Q96CX6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC58Q96CX6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC58Q96CX6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC58Q96CX6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LRRC58Q96CX6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
LRRC58Q96CX6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC58Q96CX6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.71■■□□□ 1.39
LRRC58Q96CX6 DUSP8P4-201ENST00000399538 1761 ntBASIC23.71■■□□□ 1.39
LRRC58Q96CX6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
LRRC58Q96CX6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC58Q96CX6 LINC00273-201ENST00000539813 1452 ntBASIC23.71■■□□□ 1.39
LRRC58Q96CX6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC58Q96CX6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
LRRC58Q96CX6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms