Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
RTF1Q92541 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC33.11■■■□□ 2.89
RTF1Q92541 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RTF1Q92541 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
RTF1Q92541 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC33.09■■■□□ 2.89
RTF1Q92541 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC33.09■■■□□ 2.89
RTF1Q92541 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC33.09■■■□□ 2.89
RTF1Q92541 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC33.08■■■□□ 2.89
RTF1Q92541 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
RTF1Q92541 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC33.08■■■□□ 2.89
RTF1Q92541 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
RTF1Q92541 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
RTF1Q92541 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
RTF1Q92541 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RTF1Q92541 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RTF1Q92541 HES4-202ENST00000428771 1040 ntTSL 2 BASIC33.06■■■□□ 2.88
RTF1Q92541 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
RTF1Q92541 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
RTF1Q92541 AC060814.1-201ENST00000554326 538 ntBASIC33.05■■■□□ 2.88
RTF1Q92541 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC33.04■■■□□ 2.88
RTF1Q92541 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC33.04■■■□□ 2.88
RTF1Q92541 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC33.03■■■□□ 2.88
RTF1Q92541 AP002414.2-202ENST00000590929 1450 ntBASIC33.03■■■□□ 2.88
RTF1Q92541 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RTF1Q92541 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC33.02■■■□□ 2.88
RTF1Q92541 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
RTF1Q92541 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RTF1Q92541 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
RTF1Q92541 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RTF1Q92541 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RTF1Q92541 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC33■■■□□ 2.87
RTF1Q92541 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC33■■■□□ 2.87
RTF1Q92541 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RTF1Q92541 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.99■■■□□ 2.87
RTF1Q92541 AC126177.7-201ENST00000547904 679 ntBASIC32.99■■■□□ 2.87
RTF1Q92541 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.99■■■□□ 2.87
RTF1Q92541 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
RTF1Q92541 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
RTF1Q92541 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RTF1Q92541 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
RTF1Q92541 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
RTF1Q92541 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
RTF1Q92541 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
RTF1Q92541 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
RTF1Q92541 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
RTF1Q92541 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
RTF1Q92541 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.96■■■□□ 2.87
RTF1Q92541 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.96■■■□□ 2.87
RTF1Q92541 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RTF1Q92541 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.96■■■□□ 2.87
RTF1Q92541 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
RTF1Q92541 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.95■■■□□ 2.87
RTF1Q92541 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
RTF1Q92541 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.95■■■□□ 2.87
RTF1Q92541 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
RTF1Q92541 ABHD17AP5-201ENST00000580133 923 ntBASIC32.95■■■□□ 2.87
RTF1Q92541 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.95■■■□□ 2.87
RTF1Q92541 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
RTF1Q92541 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
RTF1Q92541 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RTF1Q92541 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RTF1Q92541 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RTF1Q92541 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RTF1Q92541 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
RTF1Q92541 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.91■■■□□ 2.86
RTF1Q92541 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
RTF1Q92541 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
RTF1Q92541 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
RTF1Q92541 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RTF1Q92541 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.9■■■□□ 2.86
RTF1Q92541 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.9■■■□□ 2.86
RTF1Q92541 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RTF1Q92541 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
RTF1Q92541 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
RTF1Q92541 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
RTF1Q92541 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RTF1Q92541 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
RTF1Q92541 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RTF1Q92541 AC139426.1-201ENST00000568218 2529 ntBASIC32.88■■■□□ 2.85
RTF1Q92541 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.87■■■□□ 2.85
RTF1Q92541 AC092296.2-201ENST00000589470 999 ntBASIC32.87■■■□□ 2.85
RTF1Q92541 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RTF1Q92541 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RTF1Q92541 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RTF1Q92541 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RTF1Q92541 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
RTF1Q92541 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.85■■■□□ 2.85
RTF1Q92541 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
RTF1Q92541 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
RTF1Q92541 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
RTF1Q92541 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
RTF1Q92541 AL359258.2-201ENST00000564063 1566 ntBASIC32.81■■■□□ 2.84
RTF1Q92541 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
RTF1Q92541 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
RTF1Q92541 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
RTF1Q92541 ECEL1P2-201ENST00000461596 1295 ntBASIC32.8■■■□□ 2.84
RTF1Q92541 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
RTF1Q92541 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RTF1Q92541 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
RTF1Q92541 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms