Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.15■□□□□ 0.82
Chmp1aQ921W0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp1aQ921W0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp1aQ921W0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Chmp1aQ921W0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp1aQ921W0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.13■□□□□ 0.81
Chmp1aQ921W0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1aQ921W0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
Chmp1aQ921W0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chmp1aQ921W0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp1aQ921W0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.12■□□□□ 0.81
Chmp1aQ921W0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Chmp1aQ921W0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp1aQ921W0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp1aQ921W0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp1aQ921W0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp1aQ921W0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp1aQ921W0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp1aQ921W0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp1aQ921W0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp1aQ921W0 Particl-201ENSMUST00000205370 1560 ntBASIC20.09■□□□□ 0.81
Chmp1aQ921W0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Chmp1aQ921W0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp1aQ921W0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Chmp1aQ921W0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp1aQ921W0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp1aQ921W0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.08■□□□□ 0.81
Chmp1aQ921W0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp1aQ921W0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Chmp1aQ921W0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp1aQ921W0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp1aQ921W0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.08■□□□□ 0.8
Chmp1aQ921W0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Chmp1aQ921W0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp1aQ921W0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Chmp1aQ921W0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Chmp1aQ921W0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp1aQ921W0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp1aQ921W0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp1aQ921W0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp1aQ921W0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp1aQ921W0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp1aQ921W0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp1aQ921W0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp1aQ921W0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.05■□□□□ 0.8
Chmp1aQ921W0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.05■□□□□ 0.8
Chmp1aQ921W0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp1aQ921W0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp1aQ921W0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp1aQ921W0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp1aQ921W0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp1aQ921W0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp1aQ921W0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp1aQ921W0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Chmp1aQ921W0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.04■□□□□ 0.8
Chmp1aQ921W0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp1aQ921W0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp1aQ921W0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp1aQ921W0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Chmp1aQ921W0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1aQ921W0 Gm30023-201ENSMUST00000197970 889 ntBASIC20■□□□□ 0.79
Chmp1aQ921W0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Chmp1aQ921W0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp1aQ921W0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp1aQ921W0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp1aQ921W0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp1aQ921W0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp1aQ921W0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp1aQ921W0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp1aQ921W0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Chmp1aQ921W0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chmp1aQ921W0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp1aQ921W0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp1aQ921W0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chmp1aQ921W0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp1aQ921W0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp1aQ921W0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Chmp1aQ921W0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Chmp1aQ921W0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp1aQ921W0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp1aQ921W0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.97■□□□□ 0.79
Chmp1aQ921W0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp1aQ921W0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chmp1aQ921W0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.96■□□□□ 0.79
Chmp1aQ921W0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp1aQ921W0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp1aQ921W0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp1aQ921W0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chmp1aQ921W0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp1aQ921W0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chmp1aQ921W0 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms