Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdha11Q91Y19 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Pcdha11Q91Y19 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdha11Q91Y19 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.19■■□□□ 1.46
Pcdha11Q91Y19 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.19■■□□□ 1.46
Pcdha11Q91Y19 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdha11Q91Y19 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdha11Q91Y19 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdha11Q91Y19 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdha11Q91Y19 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdha11Q91Y19 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdha11Q91Y19 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.17■■□□□ 1.46
Pcdha11Q91Y19 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.17■■□□□ 1.46
Pcdha11Q91Y19 Gm9812-201ENSMUST00000061934 968 ntBASIC24.17■■□□□ 1.46
Pcdha11Q91Y19 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdha11Q91Y19 Mir6538-201ENSMUST00000183713 110 ntBASIC24.16■■□□□ 1.46
Pcdha11Q91Y19 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdha11Q91Y19 Gm9806-201ENSMUST00000051080 552 ntBASIC24.16■■□□□ 1.46
Pcdha11Q91Y19 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.15■■□□□ 1.46
Pcdha11Q91Y19 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.14■■□□□ 1.46
Pcdha11Q91Y19 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdha11Q91Y19 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Pcdha11Q91Y19 Gm11687-201ENSMUST00000118911 886 ntBASIC24.13■■□□□ 1.45
Pcdha11Q91Y19 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdha11Q91Y19 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Pcdha11Q91Y19 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdha11Q91Y19 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdha11Q91Y19 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdha11Q91Y19 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.11■■□□□ 1.45
Pcdha11Q91Y19 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdha11Q91Y19 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdha11Q91Y19 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.11■■□□□ 1.45
Pcdha11Q91Y19 Gm16437-201ENSMUST00000025669 507 ntBASIC24.11■■□□□ 1.45
Pcdha11Q91Y19 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdha11Q91Y19 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdha11Q91Y19 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdha11Q91Y19 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Pcdha11Q91Y19 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdha11Q91Y19 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdha11Q91Y19 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Pcdha11Q91Y19 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Pcdha11Q91Y19 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdha11Q91Y19 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha11Q91Y19 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.06■■□□□ 1.44
Pcdha11Q91Y19 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.05■■□□□ 1.44
Pcdha11Q91Y19 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha11Q91Y19 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.04■■□□□ 1.44
Pcdha11Q91Y19 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha11Q91Y19 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Pcdha11Q91Y19 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Pcdha11Q91Y19 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha11Q91Y19 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.03■■□□□ 1.44
Pcdha11Q91Y19 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha11Q91Y19 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha11Q91Y19 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Pcdha11Q91Y19 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Pcdha11Q91Y19 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha11Q91Y19 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha11Q91Y19 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha11Q91Y19 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha11Q91Y19 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24■■□□□ 1.43
Pcdha11Q91Y19 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdha11Q91Y19 Terc-201ENSMUST00000082862 423 ntBASIC23.99■■□□□ 1.43
Pcdha11Q91Y19 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
Pcdha11Q91Y19 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha11Q91Y19 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha11Q91Y19 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha11Q91Y19 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha11Q91Y19 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Pcdha11Q91Y19 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.97■■□□□ 1.43
Pcdha11Q91Y19 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha11Q91Y19 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha11Q91Y19 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha11Q91Y19 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha11Q91Y19 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha11Q91Y19 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha11Q91Y19 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Pcdha11Q91Y19 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha11Q91Y19 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.96■■□□□ 1.43
Pcdha11Q91Y19 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Pcdha11Q91Y19 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha11Q91Y19 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Pcdha11Q91Y19 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha11Q91Y19 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha11Q91Y19 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha11Q91Y19 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Pcdha11Q91Y19 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha11Q91Y19 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha11Q91Y19 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha11Q91Y19 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.94■■□□□ 1.42
Pcdha11Q91Y19 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.94■■□□□ 1.42
Pcdha11Q91Y19 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms