Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Mir3960-201ENSMUST00000198213 73 ntBASIC26.23■■□□□ 1.79
Ddx41Q91VN6 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.23■■□□□ 1.79
Ddx41Q91VN6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.23■■□□□ 1.79
Ddx41Q91VN6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx41Q91VN6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ddx41Q91VN6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx41Q91VN6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx41Q91VN6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx41Q91VN6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx41Q91VN6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx41Q91VN6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx41Q91VN6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx41Q91VN6 Scarna2-201ENSMUST00000157560 414 ntBASIC26.2■■□□□ 1.78
Ddx41Q91VN6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx41Q91VN6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx41Q91VN6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx41Q91VN6 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.19■■□□□ 1.78
Ddx41Q91VN6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx41Q91VN6 Gm45364-201ENSMUST00000210883 159 ntBASIC26.18■■□□□ 1.78
Ddx41Q91VN6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx41Q91VN6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx41Q91VN6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx41Q91VN6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Ddx41Q91VN6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.17■■□□□ 1.78
Ddx41Q91VN6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx41Q91VN6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.15■■□□□ 1.78
Ddx41Q91VN6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx41Q91VN6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx41Q91VN6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx41Q91VN6 Gm9806-201ENSMUST00000051080 552 ntBASIC26.14■■□□□ 1.78
Ddx41Q91VN6 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.14■■□□□ 1.78
Ddx41Q91VN6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.13■■□□□ 1.77
Ddx41Q91VN6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Ddx41Q91VN6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx41Q91VN6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
Ddx41Q91VN6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx41Q91VN6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx41Q91VN6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx41Q91VN6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx41Q91VN6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx41Q91VN6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx41Q91VN6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx41Q91VN6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.11■■□□□ 1.77
Ddx41Q91VN6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx41Q91VN6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx41Q91VN6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx41Q91VN6 Gm11687-201ENSMUST00000118911 886 ntBASIC26.1■■□□□ 1.77
Ddx41Q91VN6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx41Q91VN6 Gm16437-201ENSMUST00000025669 507 ntBASIC26.1■■□□□ 1.77
Ddx41Q91VN6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx41Q91VN6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx41Q91VN6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx41Q91VN6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Ddx41Q91VN6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx41Q91VN6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx41Q91VN6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx41Q91VN6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx41Q91VN6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.07■■□□□ 1.76
Ddx41Q91VN6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx41Q91VN6 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.07■■□□□ 1.76
Ddx41Q91VN6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx41Q91VN6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx41Q91VN6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.06■■□□□ 1.76
Ddx41Q91VN6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Ddx41Q91VN6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx41Q91VN6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx41Q91VN6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx41Q91VN6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Ddx41Q91VN6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx41Q91VN6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Ddx41Q91VN6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx41Q91VN6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx41Q91VN6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx41Q91VN6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx41Q91VN6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx41Q91VN6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx41Q91VN6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.02■■□□□ 1.76
Ddx41Q91VN6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx41Q91VN6 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.02■■□□□ 1.76
Ddx41Q91VN6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx41Q91VN6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.01■■□□□ 1.75
Ddx41Q91VN6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.01■■□□□ 1.75
Ddx41Q91VN6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26■■□□□ 1.75
Ddx41Q91VN6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26■■□□□ 1.75
Ddx41Q91VN6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx41Q91VN6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx41Q91VN6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.98■■□□□ 1.75
Ddx41Q91VN6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx41Q91VN6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx41Q91VN6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx41Q91VN6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx41Q91VN6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx41Q91VN6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Gm12366-201ENSMUST00000121722 873 ntBASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Gm5786-201ENSMUST00000085368 882 ntBASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms