Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD2Q8WV60 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD2Q8WV60 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD2Q8WV60 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.5■■□□□ 1.67
PTCD2Q8WV60 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.5■■□□□ 1.67
PTCD2Q8WV60 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PTCD2Q8WV60 AC018358.1-201ENST00000631079 1402 ntBASIC25.49■■□□□ 1.67
PTCD2Q8WV60 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
PTCD2Q8WV60 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PTCD2Q8WV60 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PTCD2Q8WV60 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PTCD2Q8WV60 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PTCD2Q8WV60 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PTCD2Q8WV60 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PTCD2Q8WV60 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.48■■□□□ 1.67
PTCD2Q8WV60 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCD2Q8WV60 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCD2Q8WV60 MIR639-201ENST00000384974 98 ntBASIC25.47■■□□□ 1.67
PTCD2Q8WV60 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.47■■□□□ 1.67
PTCD2Q8WV60 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCD2Q8WV60 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCD2Q8WV60 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
PTCD2Q8WV60 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
PTCD2Q8WV60 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.45■■□□□ 1.66
PTCD2Q8WV60 AL121749.1-202ENST00000609313 2153 ntBASIC25.45■■□□□ 1.66
PTCD2Q8WV60 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
PTCD2Q8WV60 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCD2Q8WV60 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCD2Q8WV60 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
PTCD2Q8WV60 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
PTCD2Q8WV60 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCD2Q8WV60 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PTCD2Q8WV60 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PTCD2Q8WV60 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
PTCD2Q8WV60 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.42■■□□□ 1.66
PTCD2Q8WV60 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCD2Q8WV60 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.42■■□□□ 1.66
PTCD2Q8WV60 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCD2Q8WV60 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCD2Q8WV60 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.41■■□□□ 1.66
PTCD2Q8WV60 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCD2Q8WV60 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCD2Q8WV60 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PTCD2Q8WV60 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PTCD2Q8WV60 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PTCD2Q8WV60 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PTCD2Q8WV60 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PTCD2Q8WV60 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.39■■□□□ 1.66
PTCD2Q8WV60 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PTCD2Q8WV60 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PTCD2Q8WV60 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
PTCD2Q8WV60 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.38■■□□□ 1.65
PTCD2Q8WV60 MIR4449-201ENST00000578365 66 ntBASIC25.38■■□□□ 1.65
PTCD2Q8WV60 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PTCD2Q8WV60 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
PTCD2Q8WV60 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD2Q8WV60 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD2Q8WV60 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
PTCD2Q8WV60 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD2Q8WV60 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.35■■□□□ 1.65
PTCD2Q8WV60 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD2Q8WV60 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PTCD2Q8WV60 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD2Q8WV60 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD2Q8WV60 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD2Q8WV60 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD2Q8WV60 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.33■■□□□ 1.65
PTCD2Q8WV60 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.64
PTCD2Q8WV60 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTCD2Q8WV60 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTCD2Q8WV60 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.32■■□□□ 1.64
PTCD2Q8WV60 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
PTCD2Q8WV60 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.32■■□□□ 1.64
PTCD2Q8WV60 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCD2Q8WV60 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PTCD2Q8WV60 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCD2Q8WV60 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCD2Q8WV60 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCD2Q8WV60 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCD2Q8WV60 AC110285.7-201ENST00000624417 1536 ntBASIC25.31■■□□□ 1.64
PTCD2Q8WV60 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTCD2Q8WV60 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTCD2Q8WV60 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
PTCD2Q8WV60 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
PTCD2Q8WV60 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTCD2Q8WV60 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTCD2Q8WV60 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTCD2Q8WV60 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTCD2Q8WV60 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.29■■□□□ 1.64
PTCD2Q8WV60 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTCD2Q8WV60 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTCD2Q8WV60 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PTCD2Q8WV60 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms