Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cspg4Q8VHY0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cspg4Q8VHY0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cspg4Q8VHY0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.26■□□□□ 0.83
Cspg4Q8VHY0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.26■□□□□ 0.83
Cspg4Q8VHY0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cspg4Q8VHY0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cspg4Q8VHY0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cspg4Q8VHY0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.25■□□□□ 0.83
Cspg4Q8VHY0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cspg4Q8VHY0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Cspg4Q8VHY0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg4Q8VHY0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Gm9812-201ENSMUST00000061934 968 ntBASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg4Q8VHY0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cspg4Q8VHY0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg4Q8VHY0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.23■□□□□ 0.83
Cspg4Q8VHY0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.23■□□□□ 0.83
Cspg4Q8VHY0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg4Q8VHY0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg4Q8VHY0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg4Q8VHY0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg4Q8VHY0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg4Q8VHY0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg4Q8VHY0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg4Q8VHY0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg4Q8VHY0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg4Q8VHY0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cspg4Q8VHY0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cspg4Q8VHY0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.18■□□□□ 0.82
Cspg4Q8VHY0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg4Q8VHY0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg4Q8VHY0 Gm9959-201ENSMUST00000068277 390 ntBASIC20.18■□□□□ 0.82
Cspg4Q8VHY0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.17■□□□□ 0.82
Cspg4Q8VHY0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg4Q8VHY0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg4Q8VHY0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg4Q8VHY0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg4Q8VHY0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg4Q8VHY0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.16■□□□□ 0.82
Cspg4Q8VHY0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cspg4Q8VHY0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg4Q8VHY0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cspg4Q8VHY0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg4Q8VHY0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cspg4Q8VHY0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.15■□□□□ 0.82
Cspg4Q8VHY0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.15■□□□□ 0.82
Cspg4Q8VHY0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cspg4Q8VHY0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cspg4Q8VHY0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg4Q8VHY0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.14■□□□□ 0.81
Cspg4Q8VHY0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg4Q8VHY0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cspg4Q8VHY0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cspg4Q8VHY0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg4Q8VHY0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg4Q8VHY0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg4Q8VHY0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cspg4Q8VHY0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cspg4Q8VHY0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg4Q8VHY0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.11■□□□□ 0.81
Cspg4Q8VHY0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg4Q8VHY0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg4Q8VHY0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg4Q8VHY0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg4Q8VHY0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cspg4Q8VHY0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cspg4Q8VHY0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg4Q8VHY0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg4Q8VHY0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg4Q8VHY0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg4Q8VHY0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cspg4Q8VHY0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg4Q8VHY0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg4Q8VHY0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.05■□□□□ 0.8
Cspg4Q8VHY0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg4Q8VHY0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg4Q8VHY0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.05■□□□□ 0.8
Cspg4Q8VHY0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.04■□□□□ 0.8
Cspg4Q8VHY0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.04■□□□□ 0.8
Cspg4Q8VHY0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.04■□□□□ 0.8
Cspg4Q8VHY0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cspg4Q8VHY0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cspg4Q8VHY0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms