Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh18Q8VHR0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh18Q8VHR0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.99■■□□□ 1.11
Pcdh18Q8VHR0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.99■■□□□ 1.11
Pcdh18Q8VHR0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh18Q8VHR0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.99■■□□□ 1.11
Pcdh18Q8VHR0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdh18Q8VHR0 Notumos-201ENSMUST00000151998 2659 ntBASIC21.98■■□□□ 1.11
Pcdh18Q8VHR0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcdh18Q8VHR0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh18Q8VHR0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh18Q8VHR0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdh18Q8VHR0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh18Q8VHR0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcdh18Q8VHR0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh18Q8VHR0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh18Q8VHR0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Pcdh18Q8VHR0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh18Q8VHR0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Pcdh18Q8VHR0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh18Q8VHR0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdh18Q8VHR0 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.95■■□□□ 1.1
Pcdh18Q8VHR0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdh18Q8VHR0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh18Q8VHR0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh18Q8VHR0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdh18Q8VHR0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh18Q8VHR0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh18Q8VHR0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh18Q8VHR0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh18Q8VHR0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh18Q8VHR0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdh18Q8VHR0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdh18Q8VHR0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh18Q8VHR0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh18Q8VHR0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh18Q8VHR0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pcdh18Q8VHR0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh18Q8VHR0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh18Q8VHR0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh18Q8VHR0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh18Q8VHR0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdh18Q8VHR0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh18Q8VHR0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh18Q8VHR0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh18Q8VHR0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh18Q8VHR0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdh18Q8VHR0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh18Q8VHR0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Pcdh18Q8VHR0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh18Q8VHR0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh18Q8VHR0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh18Q8VHR0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh18Q8VHR0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh18Q8VHR0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh18Q8VHR0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Pcdh18Q8VHR0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh18Q8VHR0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh18Q8VHR0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh18Q8VHR0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Pcdh18Q8VHR0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh18Q8VHR0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh18Q8VHR0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh18Q8VHR0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh18Q8VHR0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh18Q8VHR0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh18Q8VHR0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcdh18Q8VHR0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh18Q8VHR0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh18Q8VHR0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh18Q8VHR0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh18Q8VHR0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh18Q8VHR0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh18Q8VHR0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcdh18Q8VHR0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh18Q8VHR0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh18Q8VHR0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh18Q8VHR0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh18Q8VHR0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh18Q8VHR0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh18Q8VHR0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh18Q8VHR0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdh18Q8VHR0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh18Q8VHR0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh18Q8VHR0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Pcdh18Q8VHR0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh18Q8VHR0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh18Q8VHR0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh18Q8VHR0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh18Q8VHR0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh18Q8VHR0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdh18Q8VHR0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms