Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf8Q8VC56 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf8Q8VC56 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Rnf8Q8VC56 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf8Q8VC56 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf8Q8VC56 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf8Q8VC56 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf8Q8VC56 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.92■■□□□ 1.1
Rnf8Q8VC56 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf8Q8VC56 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf8Q8VC56 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf8Q8VC56 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf8Q8VC56 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Rnf8Q8VC56 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf8Q8VC56 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf8Q8VC56 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf8Q8VC56 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf8Q8VC56 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf8Q8VC56 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.9■■□□□ 1.1
Rnf8Q8VC56 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Rnf8Q8VC56 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
Rnf8Q8VC56 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf8Q8VC56 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf8Q8VC56 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.89■■□□□ 1.09
Rnf8Q8VC56 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rnf8Q8VC56 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf8Q8VC56 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf8Q8VC56 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf8Q8VC56 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf8Q8VC56 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rnf8Q8VC56 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf8Q8VC56 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Rnf8Q8VC56 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf8Q8VC56 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf8Q8VC56 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.87■■□□□ 1.09
Rnf8Q8VC56 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.87■■□□□ 1.09
Rnf8Q8VC56 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.85■■□□□ 1.09
Rnf8Q8VC56 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf8Q8VC56 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.85■■□□□ 1.09
Rnf8Q8VC56 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf8Q8VC56 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.85■■□□□ 1.09
Rnf8Q8VC56 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.85■■□□□ 1.09
Rnf8Q8VC56 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf8Q8VC56 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf8Q8VC56 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf8Q8VC56 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf8Q8VC56 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf8Q8VC56 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf8Q8VC56 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf8Q8VC56 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rnf8Q8VC56 Gm7432-201ENSMUST00000210343 879 ntBASIC21.82■■□□□ 1.08
Rnf8Q8VC56 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf8Q8VC56 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf8Q8VC56 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf8Q8VC56 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf8Q8VC56 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf8Q8VC56 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Rnf8Q8VC56 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf8Q8VC56 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.8■■□□□ 1.08
Rnf8Q8VC56 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf8Q8VC56 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf8Q8VC56 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf8Q8VC56 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.79■■□□□ 1.08
Rnf8Q8VC56 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.79■■□□□ 1.08
Rnf8Q8VC56 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf8Q8VC56 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf8Q8VC56 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf8Q8VC56 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf8Q8VC56 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf8Q8VC56 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf8Q8VC56 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf8Q8VC56 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.77■■□□□ 1.08
Rnf8Q8VC56 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Rnf8Q8VC56 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf8Q8VC56 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf8Q8VC56 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf8Q8VC56 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Rnf8Q8VC56 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf8Q8VC56 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rnf8Q8VC56 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf8Q8VC56 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf8Q8VC56 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf8Q8VC56 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf8Q8VC56 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf8Q8VC56 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf8Q8VC56 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf8Q8VC56 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf8Q8VC56 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf8Q8VC56 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf8Q8VC56 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.71■■□□□ 1.07
Rnf8Q8VC56 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf8Q8VC56 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf8Q8VC56 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms