Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25■■□□□ 1.59
PPP4R1Q8TF05 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PPP4R1Q8TF05 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25■■□□□ 1.59
PPP4R1Q8TF05 AC100797.4-201ENST00000631653 1827 ntBASIC25■■□□□ 1.59
PPP4R1Q8TF05 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PPP4R1Q8TF05 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.99■■□□□ 1.59
PPP4R1Q8TF05 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PPP4R1Q8TF05 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PPP4R1Q8TF05 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.98■■□□□ 1.59
PPP4R1Q8TF05 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.98■■□□□ 1.59
PPP4R1Q8TF05 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.98■■□□□ 1.59
PPP4R1Q8TF05 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PPP4R1Q8TF05 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.97■■□□□ 1.59
PPP4R1Q8TF05 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.97■■□□□ 1.59
PPP4R1Q8TF05 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PPP4R1Q8TF05 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PPP4R1Q8TF05 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.97■■□□□ 1.59
PPP4R1Q8TF05 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.97■■□□□ 1.59
PPP4R1Q8TF05 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PPP4R1Q8TF05 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PPP4R1Q8TF05 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.96■■□□□ 1.59
PPP4R1Q8TF05 AC135731.1-201ENST00000569415 2548 ntBASIC24.96■■□□□ 1.59
PPP4R1Q8TF05 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PPP4R1Q8TF05 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PPP4R1Q8TF05 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
PPP4R1Q8TF05 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
PPP4R1Q8TF05 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PPP4R1Q8TF05 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.95■■□□□ 1.58
PPP4R1Q8TF05 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.94■■□□□ 1.58
PPP4R1Q8TF05 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
PPP4R1Q8TF05 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PPP4R1Q8TF05 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
PPP4R1Q8TF05 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PPP4R1Q8TF05 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
PPP4R1Q8TF05 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.92■■□□□ 1.58
PPP4R1Q8TF05 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.92■■□□□ 1.58
PPP4R1Q8TF05 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PPP4R1Q8TF05 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PPP4R1Q8TF05 AL449106.1-201ENST00000608517 1980 ntBASIC24.91■■□□□ 1.58
PPP4R1Q8TF05 AP002414.2-202ENST00000590929 1450 ntBASIC24.91■■□□□ 1.58
PPP4R1Q8TF05 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.91■■□□□ 1.58
PPP4R1Q8TF05 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R1Q8TF05 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.91■■□□□ 1.58
PPP4R1Q8TF05 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R1Q8TF05 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R1Q8TF05 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.9■■□□□ 1.58
PPP4R1Q8TF05 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R1Q8TF05 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.89■■□□□ 1.58
PPP4R1Q8TF05 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PPP4R1Q8TF05 AC108673.1-201ENST00000510422 1159 ntBASIC24.89■■□□□ 1.58
PPP4R1Q8TF05 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.88■■□□□ 1.57
PPP4R1Q8TF05 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R1Q8TF05 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R1Q8TF05 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R1Q8TF05 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.87■■□□□ 1.57
PPP4R1Q8TF05 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R1Q8TF05 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R1Q8TF05 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R1Q8TF05 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R1Q8TF05 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R1Q8TF05 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
PPP4R1Q8TF05 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R1Q8TF05 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R1Q8TF05 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R1Q8TF05 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R1Q8TF05 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.85■■□□□ 1.57
PPP4R1Q8TF05 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R1Q8TF05 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R1Q8TF05 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.84■■□□□ 1.57
PPP4R1Q8TF05 ZNRF2P2-203ENST00000454624 420 ntBASIC24.84■■□□□ 1.57
PPP4R1Q8TF05 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
PPP4R1Q8TF05 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.84■■□□□ 1.57
PPP4R1Q8TF05 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPP4R1Q8TF05 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPP4R1Q8TF05 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPP4R1Q8TF05 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPP4R1Q8TF05 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPP4R1Q8TF05 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PPP4R1Q8TF05 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.83■■□□□ 1.56
PPP4R1Q8TF05 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
PPP4R1Q8TF05 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PPP4R1Q8TF05 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.82■■□□□ 1.56
PPP4R1Q8TF05 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PPP4R1Q8TF05 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
PPP4R1Q8TF05 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R1Q8TF05 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.81■■□□□ 1.56
PPP4R1Q8TF05 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.81■■□□□ 1.56
PPP4R1Q8TF05 HLA-V-202ENST00000446817 847 ntBASIC24.81■■□□□ 1.56
PPP4R1Q8TF05 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R1Q8TF05 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.81■■□□□ 1.56
PPP4R1Q8TF05 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms