Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Sh3kbp1Q8R550 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sh3kbp1Q8R550 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sh3kbp1Q8R550 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Sh3kbp1Q8R550 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sh3kbp1Q8R550 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Gm4799-201ENSMUST00000095396 657 ntBASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Sh3kbp1Q8R550 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sh3kbp1Q8R550 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sh3kbp1Q8R550 Gm37136-201ENSMUST00000194368 194 ntBASIC23.53■■□□□ 1.36
Sh3kbp1Q8R550 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
Sh3kbp1Q8R550 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Gm9806-201ENSMUST00000051080 552 ntBASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3kbp1Q8R550 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.51■■□□□ 1.35
Sh3kbp1Q8R550 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Mir3960-201ENSMUST00000198213 73 ntBASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Gm16437-201ENSMUST00000025669 507 ntBASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Gm11687-201ENSMUST00000118911 886 ntBASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Gm45364-201ENSMUST00000210883 159 ntBASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.48■■□□□ 1.35
Sh3kbp1Q8R550 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.46■■□□□ 1.35
Sh3kbp1Q8R550 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sh3kbp1Q8R550 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sh3kbp1Q8R550 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Sh3kbp1Q8R550 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.45■■□□□ 1.34
Sh3kbp1Q8R550 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3kbp1Q8R550 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3kbp1Q8R550 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3kbp1Q8R550 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3kbp1Q8R550 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Sh3kbp1Q8R550 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sh3kbp1Q8R550 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.41■■□□□ 1.34
Sh3kbp1Q8R550 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sh3kbp1Q8R550 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Sh3kbp1Q8R550 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm12366-201ENSMUST00000121722 873 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm5786-201ENSMUST00000085368 882 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.34■■□□□ 1.33
Sh3kbp1Q8R550 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3kbp1Q8R550 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3kbp1Q8R550 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms