Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC26.99■■□□□ 1.91
Pdlim2Q8R1G6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Pdlim2Q8R1G6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
Pdlim2Q8R1G6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pdlim2Q8R1G6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.98■■□□□ 1.91
Pdlim2Q8R1G6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pdlim2Q8R1G6 Gm26766-202ENSMUST00000227544 2347 ntBASIC26.98■■□□□ 1.91
Pdlim2Q8R1G6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pdlim2Q8R1G6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.98■■□□□ 1.91
Pdlim2Q8R1G6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pdlim2Q8R1G6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pdlim2Q8R1G6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.96■■□□□ 1.91
Pdlim2Q8R1G6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pdlim2Q8R1G6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pdlim2Q8R1G6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pdlim2Q8R1G6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Pdlim2Q8R1G6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Pdlim2Q8R1G6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC26.94■■□□□ 1.9
Pdlim2Q8R1G6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pdlim2Q8R1G6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pdlim2Q8R1G6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Pdlim2Q8R1G6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.93■■□□□ 1.9
Pdlim2Q8R1G6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Pdlim2Q8R1G6 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.92■■□□□ 1.9
Pdlim2Q8R1G6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Pdlim2Q8R1G6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Pdlim2Q8R1G6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC26.92■■□□□ 1.9
Pdlim2Q8R1G6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Pdlim2Q8R1G6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pdlim2Q8R1G6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pdlim2Q8R1G6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pdlim2Q8R1G6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pdlim2Q8R1G6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Pdlim2Q8R1G6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.89
Pdlim2Q8R1G6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Pdlim2Q8R1G6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pdlim2Q8R1G6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pdlim2Q8R1G6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Pdlim2Q8R1G6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pdlim2Q8R1G6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Pdlim2Q8R1G6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.87■■□□□ 1.89
Pdlim2Q8R1G6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pdlim2Q8R1G6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Pdlim2Q8R1G6 Peli2-204ENSMUST00000226513 1320 ntBASIC26.86■■□□□ 1.89
Pdlim2Q8R1G6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pdlim2Q8R1G6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC26.84■■□□□ 1.89
Pdlim2Q8R1G6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Pdlim2Q8R1G6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Pdlim2Q8R1G6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pdlim2Q8R1G6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Pdlim2Q8R1G6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pdlim2Q8R1G6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Pdlim2Q8R1G6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pdlim2Q8R1G6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pdlim2Q8R1G6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Pdlim2Q8R1G6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pdlim2Q8R1G6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Pdlim2Q8R1G6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Pdlim2Q8R1G6 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.82■■□□□ 1.88
Pdlim2Q8R1G6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pdlim2Q8R1G6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pdlim2Q8R1G6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pdlim2Q8R1G6 Notumos-201ENSMUST00000151998 2659 ntBASIC26.82■■□□□ 1.88
Pdlim2Q8R1G6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pdlim2Q8R1G6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pdlim2Q8R1G6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pdlim2Q8R1G6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Pdlim2Q8R1G6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pdlim2Q8R1G6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pdlim2Q8R1G6 Gm27322-201ENSMUST00000184007 104 ntBASIC26.8■■□□□ 1.88
Pdlim2Q8R1G6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.8■■□□□ 1.88
Pdlim2Q8R1G6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Pdlim2Q8R1G6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pdlim2Q8R1G6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Pdlim2Q8R1G6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pdlim2Q8R1G6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
Pdlim2Q8R1G6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pdlim2Q8R1G6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pdlim2Q8R1G6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pdlim2Q8R1G6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC26.77■■□□□ 1.88
Pdlim2Q8R1G6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pdlim2Q8R1G6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
Pdlim2Q8R1G6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pdlim2Q8R1G6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
Pdlim2Q8R1G6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pdlim2Q8R1G6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pdlim2Q8R1G6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pdlim2Q8R1G6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Pdlim2Q8R1G6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pdlim2Q8R1G6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Pdlim2Q8R1G6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pdlim2Q8R1G6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pdlim2Q8R1G6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pdlim2Q8R1G6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pdlim2Q8R1G6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.7■■□□□ 1.86
Pdlim2Q8R1G6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pdlim2Q8R1G6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pdlim2Q8R1G6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
Pdlim2Q8R1G6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Pdlim2Q8R1G6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms