Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPTSSBQ8NFR3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms