Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01561Q8N1V8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01561Q8N1V8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01561Q8N1V8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 AC145676.1-201ENST00000514988 2004 ntBASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 WHAMMP2-203ENST00000563942 1603 ntBASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 AL449106.1-201ENST00000608517 1980 ntBASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 AC005559.1-201ENST00000589661 871 ntBASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01561Q8N1V8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01561Q8N1V8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.77■□□□□ 0.28
LINC01561Q8N1V8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 DUSP8P4-201ENST00000399538 1761 ntBASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01561Q8N1V8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LINC01561Q8N1V8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01561Q8N1V8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01561Q8N1V8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01561Q8N1V8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LINC01561Q8N1V8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 MIR6090-201ENST00000622481 60 ntBASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 AC092803.2-201ENST00000564287 1899 ntBASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms