Protein–RNA interactions for Protein: Q8K158

Cnppd1, Protein CNPPD1, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnppd1Q8K158 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.63■□□□□ 0.89
Cnppd1Q8K158 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnppd1Q8K158 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cnppd1Q8K158 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnppd1Q8K158 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnppd1Q8K158 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnppd1Q8K158 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnppd1Q8K158 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cnppd1Q8K158 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cnppd1Q8K158 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnppd1Q8K158 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cnppd1Q8K158 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnppd1Q8K158 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cnppd1Q8K158 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnppd1Q8K158 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cnppd1Q8K158 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.59■□□□□ 0.89
Cnppd1Q8K158 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnppd1Q8K158 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cnppd1Q8K158 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cnppd1Q8K158 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cnppd1Q8K158 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.58■□□□□ 0.89
Cnppd1Q8K158 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnppd1Q8K158 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Cnppd1Q8K158 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnppd1Q8K158 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.56■□□□□ 0.88
Cnppd1Q8K158 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
Cnppd1Q8K158 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnppd1Q8K158 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnppd1Q8K158 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnppd1Q8K158 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.55■□□□□ 0.88
Cnppd1Q8K158 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.55■□□□□ 0.88
Cnppd1Q8K158 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.55■□□□□ 0.88
Cnppd1Q8K158 Gm7432-201ENSMUST00000210343 879 ntBASIC20.55■□□□□ 0.88
Cnppd1Q8K158 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnppd1Q8K158 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnppd1Q8K158 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.54■□□□□ 0.88
Cnppd1Q8K158 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnppd1Q8K158 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnppd1Q8K158 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnppd1Q8K158 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.54■□□□□ 0.88
Cnppd1Q8K158 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnppd1Q8K158 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cnppd1Q8K158 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnppd1Q8K158 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cnppd1Q8K158 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cnppd1Q8K158 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cnppd1Q8K158 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cnppd1Q8K158 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cnppd1Q8K158 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cnppd1Q8K158 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cnppd1Q8K158 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnppd1Q8K158 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnppd1Q8K158 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnppd1Q8K158 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnppd1Q8K158 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnppd1Q8K158 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cnppd1Q8K158 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cnppd1Q8K158 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnppd1Q8K158 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cnppd1Q8K158 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnppd1Q8K158 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.48■□□□□ 0.87
Cnppd1Q8K158 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Cnppd1Q8K158 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnppd1Q8K158 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnppd1Q8K158 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cnppd1Q8K158 Gm11599-201ENSMUST00000118720 878 ntBASIC20.46■□□□□ 0.87
Cnppd1Q8K158 Gm37136-201ENSMUST00000194368 194 ntBASIC20.46■□□□□ 0.87
Cnppd1Q8K158 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnppd1Q8K158 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnppd1Q8K158 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnppd1Q8K158 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cnppd1Q8K158 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cnppd1Q8K158 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Cnppd1Q8K158 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cnppd1Q8K158 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnppd1Q8K158 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnppd1Q8K158 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnppd1Q8K158 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cnppd1Q8K158 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cnppd1Q8K158 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnppd1Q8K158 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnppd1Q8K158 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cnppd1Q8K158 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnppd1Q8K158 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Cnppd1Q8K158 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnppd1Q8K158 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnppd1Q8K158 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cnppd1Q8K158 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnppd1Q8K158 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnppd1Q8K158 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cnppd1Q8K158 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cnppd1Q8K158 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.41■□□□□ 0.86
Cnppd1Q8K158 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Cnppd1Q8K158 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cnppd1Q8K158 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cnppd1Q8K158 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cnppd1Q8K158 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Cnppd1Q8K158 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnppd1Q8K158 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnppd1Q8K158 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms