Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.56■■■□□ 2.96
CCDC146Q8IYE0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC33.56■■■□□ 2.96
CCDC146Q8IYE0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
CCDC146Q8IYE0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC33.55■■■□□ 2.96
CCDC146Q8IYE0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.55■■■□□ 2.96
CCDC146Q8IYE0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC33.55■■■□□ 2.96
CCDC146Q8IYE0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC33.53■■■□□ 2.96
CCDC146Q8IYE0 HLA-V-202ENST00000446817 847 ntBASIC33.53■■■□□ 2.96
CCDC146Q8IYE0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
CCDC146Q8IYE0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
CCDC146Q8IYE0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
CCDC146Q8IYE0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
CCDC146Q8IYE0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
CCDC146Q8IYE0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CCDC146Q8IYE0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CCDC146Q8IYE0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CCDC146Q8IYE0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CCDC146Q8IYE0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
CCDC146Q8IYE0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
CCDC146Q8IYE0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
CCDC146Q8IYE0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CCDC146Q8IYE0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.49■■■□□ 2.95
CCDC146Q8IYE0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CCDC146Q8IYE0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC33.48■■■□□ 2.95
CCDC146Q8IYE0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC33.46■■■□□ 2.95
CCDC146Q8IYE0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
CCDC146Q8IYE0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC33.46■■■□□ 2.95
CCDC146Q8IYE0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.95
CCDC146Q8IYE0 MIR639-201ENST00000384974 98 ntBASIC33.45■■■□□ 2.95
CCDC146Q8IYE0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
CCDC146Q8IYE0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC33.44■■■□□ 2.94
CCDC146Q8IYE0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC33.44■■■□□ 2.94
CCDC146Q8IYE0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
CCDC146Q8IYE0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
CCDC146Q8IYE0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
CCDC146Q8IYE0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC33.44■■■□□ 2.94
CCDC146Q8IYE0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC33.43■■■□□ 2.94
CCDC146Q8IYE0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CCDC146Q8IYE0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CCDC146Q8IYE0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC33.42■■■□□ 2.94
CCDC146Q8IYE0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
CCDC146Q8IYE0 AC018358.1-201ENST00000631079 1402 ntBASIC33.41■■■□□ 2.94
CCDC146Q8IYE0 LINC01003-201ENST00000564834 1764 ntBASIC33.4■■■□□ 2.94
CCDC146Q8IYE0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC33.4■■■□□ 2.94
CCDC146Q8IYE0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC33.4■■■□□ 2.94
CCDC146Q8IYE0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CCDC146Q8IYE0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC33.39■■■□□ 2.94
CCDC146Q8IYE0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CCDC146Q8IYE0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC33.38■■■□□ 2.93
CCDC146Q8IYE0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
CCDC146Q8IYE0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
CCDC146Q8IYE0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CCDC146Q8IYE0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CCDC146Q8IYE0 AC008813.1-201ENST00000536597 885 ntBASIC33.34■■■□□ 2.93
CCDC146Q8IYE0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CCDC146Q8IYE0 BX255925.1-201ENST00000566954 1854 ntBASIC33.33■■■□□ 2.93
CCDC146Q8IYE0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CCDC146Q8IYE0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC33.33■■■□□ 2.93
CCDC146Q8IYE0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
CCDC146Q8IYE0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CCDC146Q8IYE0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33.32■■■□□ 2.92
CCDC146Q8IYE0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.92
CCDC146Q8IYE0 MIR219A2-201ENST00000608502 1504 ntBASIC33.32■■■□□ 2.92
CCDC146Q8IYE0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
CCDC146Q8IYE0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC33.31■■■□□ 2.92
CCDC146Q8IYE0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
CCDC146Q8IYE0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
CCDC146Q8IYE0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CCDC146Q8IYE0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.3■■■□□ 2.92
CCDC146Q8IYE0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
CCDC146Q8IYE0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.92
CCDC146Q8IYE0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
CCDC146Q8IYE0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CCDC146Q8IYE0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
CCDC146Q8IYE0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CCDC146Q8IYE0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
CCDC146Q8IYE0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
CCDC146Q8IYE0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CCDC146Q8IYE0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CCDC146Q8IYE0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.92
CCDC146Q8IYE0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC33.26■■■□□ 2.91
CCDC146Q8IYE0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 MIR4449-201ENST00000578365 66 ntBASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 AC148477.6-201ENST00000623746 465 ntBASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC33.25■■■□□ 2.91
CCDC146Q8IYE0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms