Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.42■■■□□ 2.62
SLX4Q8IY92 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.42■■■□□ 2.62
SLX4Q8IY92 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLX4Q8IY92 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SLX4Q8IY92 AC126177.7-201ENST00000547904 679 ntBASIC31.42■■■□□ 2.62
SLX4Q8IY92 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLX4Q8IY92 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.41■■■□□ 2.62
SLX4Q8IY92 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
SLX4Q8IY92 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SLX4Q8IY92 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.41■■■□□ 2.62
SLX4Q8IY92 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SLX4Q8IY92 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SLX4Q8IY92 AC133552.2-201ENST00000619106 1032 ntBASIC31.4■■■□□ 2.62
SLX4Q8IY92 AL035685.1-201ENST00000636663 812 ntBASIC31.4■■■□□ 2.62
SLX4Q8IY92 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.4■■■□□ 2.62
SLX4Q8IY92 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SLX4Q8IY92 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.4■■■□□ 2.62
SLX4Q8IY92 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SLX4Q8IY92 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.39■■■□□ 2.62
SLX4Q8IY92 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.39■■■□□ 2.62
SLX4Q8IY92 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLX4Q8IY92 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLX4Q8IY92 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.38■■■□□ 2.61
SLX4Q8IY92 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLX4Q8IY92 DUX4L18-201ENST00000553347 1267 ntBASIC31.38■■■□□ 2.61
SLX4Q8IY92 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.38■■■□□ 2.61
SLX4Q8IY92 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SLX4Q8IY92 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SLX4Q8IY92 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLX4Q8IY92 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLX4Q8IY92 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLX4Q8IY92 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
SLX4Q8IY92 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.36■■■□□ 2.61
SLX4Q8IY92 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.34■■■□□ 2.61
SLX4Q8IY92 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.34■■■□□ 2.61
SLX4Q8IY92 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SLX4Q8IY92 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.32■■■□□ 2.61
SLX4Q8IY92 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLX4Q8IY92 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLX4Q8IY92 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLX4Q8IY92 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLX4Q8IY92 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.32■■■□□ 2.6
SLX4Q8IY92 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SLX4Q8IY92 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SLX4Q8IY92 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SLX4Q8IY92 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.31■■■□□ 2.6
SLX4Q8IY92 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.3■■■□□ 2.6
SLX4Q8IY92 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
SLX4Q8IY92 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.3■■■□□ 2.6
SLX4Q8IY92 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
SLX4Q8IY92 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLX4Q8IY92 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLX4Q8IY92 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.29■■■□□ 2.6
SLX4Q8IY92 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SLX4Q8IY92 AC025884.2-201ENST00000553429 711 ntBASIC31.28■■■□□ 2.6
SLX4Q8IY92 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.28■■■□□ 2.6
SLX4Q8IY92 DUX4L9-201ENST00000449051 1259 ntBASIC31.28■■■□□ 2.6
SLX4Q8IY92 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SLX4Q8IY92 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SLX4Q8IY92 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.27■■■□□ 2.6
SLX4Q8IY92 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLX4Q8IY92 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
SLX4Q8IY92 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SLX4Q8IY92 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
SLX4Q8IY92 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.26■■■□□ 2.59
SLX4Q8IY92 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.26■■■□□ 2.59
SLX4Q8IY92 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SLX4Q8IY92 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SLX4Q8IY92 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.24■■■□□ 2.59
SLX4Q8IY92 AL592295.1-201ENST00000400984 884 ntBASIC31.23■■■□□ 2.59
SLX4Q8IY92 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
SLX4Q8IY92 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SLX4Q8IY92 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.22■■■□□ 2.59
SLX4Q8IY92 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SLX4Q8IY92 SPCS2P3-201ENST00000500401 656 ntBASIC31.21■■■□□ 2.59
SLX4Q8IY92 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.21■■■□□ 2.59
SLX4Q8IY92 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.21■■■□□ 2.59
SLX4Q8IY92 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
SLX4Q8IY92 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SLX4Q8IY92 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SLX4Q8IY92 AC026202.3-201ENST00000600805 1127 ntBASIC31.21■■■□□ 2.59
SLX4Q8IY92 SMPD5-203ENST00000639008 1464 ntBASIC31.2■■■□□ 2.59
SLX4Q8IY92 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.2■■■□□ 2.59
SLX4Q8IY92 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLX4Q8IY92 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLX4Q8IY92 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.19■■■□□ 2.58
SLX4Q8IY92 AC093536.1-201ENST00000569153 554 ntBASIC31.18■■■□□ 2.58
SLX4Q8IY92 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
SLX4Q8IY92 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
SLX4Q8IY92 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.18■■■□□ 2.58
SLX4Q8IY92 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SLX4Q8IY92 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SLX4Q8IY92 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
SLX4Q8IY92 AC009299.2-201ENST00000482477 511 ntBASIC31.17■■■□□ 2.58
SLX4Q8IY92 RAP2CP1-202ENST00000605179 643 ntBASIC31.17■■■□□ 2.58
SLX4Q8IY92 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SLX4Q8IY92 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SLX4Q8IY92 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.16■■■□□ 2.58
SLX4Q8IY92 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SLX4Q8IY92 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms