Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.69■■□□□ 1.86
RNF135Q8IUD6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF135Q8IUD6 ECEL1P2-201ENST00000461596 1295 ntBASIC26.68■■□□□ 1.86
RNF135Q8IUD6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
RNF135Q8IUD6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF135Q8IUD6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RNF135Q8IUD6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.67■■□□□ 1.86
RNF135Q8IUD6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF135Q8IUD6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF135Q8IUD6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RNF135Q8IUD6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RNF135Q8IUD6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.66■■□□□ 1.86
RNF135Q8IUD6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
RNF135Q8IUD6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.65■■□□□ 1.86
RNF135Q8IUD6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF135Q8IUD6 ST7-AS1-201ENST00000456775 1889 ntBASIC26.64■■□□□ 1.85
RNF135Q8IUD6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF135Q8IUD6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
RNF135Q8IUD6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RNF135Q8IUD6 DUX4L18-201ENST00000553347 1267 ntBASIC26.63■■□□□ 1.85
RNF135Q8IUD6 AC129492.7-201ENST00000622992 756 ntBASIC26.63■■□□□ 1.85
RNF135Q8IUD6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
RNF135Q8IUD6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RNF135Q8IUD6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
RNF135Q8IUD6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RNF135Q8IUD6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF135Q8IUD6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.61■■□□□ 1.85
RNF135Q8IUD6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF135Q8IUD6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF135Q8IUD6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF135Q8IUD6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF135Q8IUD6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF135Q8IUD6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
RNF135Q8IUD6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.6■■□□□ 1.85
RNF135Q8IUD6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF135Q8IUD6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF135Q8IUD6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF135Q8IUD6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF135Q8IUD6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RNF135Q8IUD6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.59■■□□□ 1.85
RNF135Q8IUD6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.59■■□□□ 1.85
RNF135Q8IUD6 AC110285.7-201ENST00000624417 1536 ntBASIC26.59■■□□□ 1.85
RNF135Q8IUD6 WHAMMP2-203ENST00000563942 1603 ntBASIC26.58■■□□□ 1.85
RNF135Q8IUD6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF135Q8IUD6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF135Q8IUD6 MIR219A2-201ENST00000608502 1504 ntBASIC26.58■■□□□ 1.85
RNF135Q8IUD6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF135Q8IUD6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.57■■□□□ 1.84
RNF135Q8IUD6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.57■■□□□ 1.84
RNF135Q8IUD6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RNF135Q8IUD6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF135Q8IUD6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF135Q8IUD6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF135Q8IUD6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RNF135Q8IUD6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.56■■□□□ 1.84
RNF135Q8IUD6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
RNF135Q8IUD6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF135Q8IUD6 AC135983.2-203ENST00000454486 1613 ntBASIC26.55■■□□□ 1.84
RNF135Q8IUD6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF135Q8IUD6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF135Q8IUD6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF135Q8IUD6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
RNF135Q8IUD6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF135Q8IUD6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.54■■□□□ 1.84
RNF135Q8IUD6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF135Q8IUD6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF135Q8IUD6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF135Q8IUD6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF135Q8IUD6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.52■■□□□ 1.84
RNF135Q8IUD6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF135Q8IUD6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RNF135Q8IUD6 AL592293.1-201ENST00000502889 1188 ntBASIC26.51■■□□□ 1.83
RNF135Q8IUD6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.51■■□□□ 1.83
RNF135Q8IUD6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RNF135Q8IUD6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
RNF135Q8IUD6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF135Q8IUD6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF135Q8IUD6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF135Q8IUD6 ABCB10P3-201ENST00000561950 2166 ntBASIC26.49■■□□□ 1.83
RNF135Q8IUD6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RNF135Q8IUD6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.49■■□□□ 1.83
RNF135Q8IUD6 AC131212.1-201ENST00000613771 668 ntBASIC26.49■■□□□ 1.83
RNF135Q8IUD6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF135Q8IUD6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.48■■□□□ 1.83
RNF135Q8IUD6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF135Q8IUD6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF135Q8IUD6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF135Q8IUD6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.46■■□□□ 1.83
RNF135Q8IUD6 AC127502.1-201ENST00000399971 1502 ntBASIC26.46■■□□□ 1.83
RNF135Q8IUD6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.46■■□□□ 1.83
RNF135Q8IUD6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
RNF135Q8IUD6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RNF135Q8IUD6 AC126177.7-201ENST00000547904 679 ntBASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms