Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim5Q8CI51 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim5Q8CI51 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim5Q8CI51 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.17■□□□□ 0.98
Pdlim5Q8CI51 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim5Q8CI51 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pdlim5Q8CI51 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim5Q8CI51 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim5Q8CI51 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim5Q8CI51 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim5Q8CI51 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pdlim5Q8CI51 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim5Q8CI51 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim5Q8CI51 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim5Q8CI51 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Pdlim5Q8CI51 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pdlim5Q8CI51 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.13■□□□□ 0.97
Pdlim5Q8CI51 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim5Q8CI51 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.12■□□□□ 0.97
Pdlim5Q8CI51 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim5Q8CI51 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim5Q8CI51 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim5Q8CI51 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim5Q8CI51 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim5Q8CI51 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.11■□□□□ 0.97
Pdlim5Q8CI51 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim5Q8CI51 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pdlim5Q8CI51 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.1■□□□□ 0.97
Pdlim5Q8CI51 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim5Q8CI51 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.1■□□□□ 0.97
Pdlim5Q8CI51 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim5Q8CI51 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim5Q8CI51 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim5Q8CI51 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim5Q8CI51 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim5Q8CI51 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim5Q8CI51 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.08■□□□□ 0.97
Pdlim5Q8CI51 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim5Q8CI51 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim5Q8CI51 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim5Q8CI51 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim5Q8CI51 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim5Q8CI51 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.07■□□□□ 0.96
Pdlim5Q8CI51 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim5Q8CI51 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim5Q8CI51 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim5Q8CI51 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.06■□□□□ 0.96
Pdlim5Q8CI51 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.06■□□□□ 0.96
Pdlim5Q8CI51 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim5Q8CI51 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim5Q8CI51 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim5Q8CI51 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim5Q8CI51 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim5Q8CI51 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim5Q8CI51 Gm37136-201ENSMUST00000194368 194 ntBASIC21.04■□□□□ 0.96
Pdlim5Q8CI51 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim5Q8CI51 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim5Q8CI51 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pdlim5Q8CI51 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim5Q8CI51 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pdlim5Q8CI51 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdlim5Q8CI51 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Pdlim5Q8CI51 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pdlim5Q8CI51 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdlim5Q8CI51 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdlim5Q8CI51 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pdlim5Q8CI51 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdlim5Q8CI51 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pdlim5Q8CI51 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.02■□□□□ 0.95
Pdlim5Q8CI51 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Gm6821-201ENSMUST00000107540 542 ntBASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim5Q8CI51 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Pdlim5Q8CI51 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim5Q8CI51 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim5Q8CI51 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdlim5Q8CI51 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdlim5Q8CI51 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.99■□□□□ 0.95
Pdlim5Q8CI51 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pdlim5Q8CI51 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdlim5Q8CI51 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim5Q8CI51 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim5Q8CI51 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim5Q8CI51 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.97■□□□□ 0.95
Pdlim5Q8CI51 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim5Q8CI51 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pdlim5Q8CI51 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim5Q8CI51 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim5Q8CI51 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim5Q8CI51 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim5Q8CI51 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pdlim5Q8CI51 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdlim5Q8CI51 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdlim5Q8CI51 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms