Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC37.77■■■■□ 3.64
Pabpn1Q8CCS6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
Pabpn1Q8CCS6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Pabpn1Q8CCS6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Pabpn1Q8CCS6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC37.77■■■■□ 3.64
Pabpn1Q8CCS6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
Pabpn1Q8CCS6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Pabpn1Q8CCS6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Pabpn1Q8CCS6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Pabpn1Q8CCS6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC37.73■■■■□ 3.63
Pabpn1Q8CCS6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Pabpn1Q8CCS6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC37.72■■■■□ 3.63
Pabpn1Q8CCS6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC37.72■■■■□ 3.63
Pabpn1Q8CCS6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
Pabpn1Q8CCS6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Pabpn1Q8CCS6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Pabpn1Q8CCS6 Gm18755-201ENSMUST00000218030 1099 ntBASIC37.71■■■■□ 3.63
Pabpn1Q8CCS6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC37.7■■■■□ 3.63
Pabpn1Q8CCS6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
Pabpn1Q8CCS6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC37.69■■■■□ 3.62
Pabpn1Q8CCS6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC37.69■■■■□ 3.62
Pabpn1Q8CCS6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Pabpn1Q8CCS6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Pabpn1Q8CCS6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
Pabpn1Q8CCS6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Pabpn1Q8CCS6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Pabpn1Q8CCS6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Pabpn1Q8CCS6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC37.65■■■■□ 3.62
Pabpn1Q8CCS6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC37.65■■■■□ 3.62
Pabpn1Q8CCS6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC37.64■■■■□ 3.62
Pabpn1Q8CCS6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Pabpn1Q8CCS6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Pabpn1Q8CCS6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC37.63■■■■□ 3.61
Pabpn1Q8CCS6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Pabpn1Q8CCS6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Pabpn1Q8CCS6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC37.61■■■■□ 3.61
Pabpn1Q8CCS6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Pabpn1Q8CCS6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Pabpn1Q8CCS6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Pabpn1Q8CCS6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC37.58■■■■□ 3.61
Pabpn1Q8CCS6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
Pabpn1Q8CCS6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Pabpn1Q8CCS6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC37.56■■■■□ 3.6
Pabpn1Q8CCS6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC37.56■■■■□ 3.6
Pabpn1Q8CCS6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC37.55■■■■□ 3.6
Pabpn1Q8CCS6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Pabpn1Q8CCS6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC37.55■■■■□ 3.6
Pabpn1Q8CCS6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Pabpn1Q8CCS6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC37.55■■■■□ 3.6
Pabpn1Q8CCS6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
Pabpn1Q8CCS6 Gm43592-201ENSMUST00000196922 1165 ntBASIC37.54■■■■□ 3.6
Pabpn1Q8CCS6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Pabpn1Q8CCS6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Pabpn1Q8CCS6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC37.53■■■■□ 3.6
Pabpn1Q8CCS6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Pabpn1Q8CCS6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Pabpn1Q8CCS6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC37.52■■■■□ 3.6
Pabpn1Q8CCS6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
Pabpn1Q8CCS6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC37.51■■■■□ 3.6
Pabpn1Q8CCS6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Pabpn1Q8CCS6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC37.49■■■■□ 3.59
Pabpn1Q8CCS6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
Pabpn1Q8CCS6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC37.49■■■■□ 3.59
Pabpn1Q8CCS6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
Pabpn1Q8CCS6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Pabpn1Q8CCS6 Gm9905-201ENSMUST00000065740 1845 ntBASIC37.48■■■■□ 3.59
Pabpn1Q8CCS6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC37.48■■■■□ 3.59
Pabpn1Q8CCS6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
Pabpn1Q8CCS6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC37.47■■■■□ 3.59
Pabpn1Q8CCS6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Pabpn1Q8CCS6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC37.46■■■■□ 3.59
Pabpn1Q8CCS6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC37.45■■■■□ 3.59
Pabpn1Q8CCS6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC37.45■■■■□ 3.59
Pabpn1Q8CCS6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC37.43■■■■□ 3.58
Pabpn1Q8CCS6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Pabpn1Q8CCS6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC37.43■■■■□ 3.58
Pabpn1Q8CCS6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
Pabpn1Q8CCS6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Pabpn1Q8CCS6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC37.42■■■■□ 3.58
Pabpn1Q8CCS6 Etf1-202ENSMUST00000180351 108 ntBASIC37.41■■■■□ 3.58
Pabpn1Q8CCS6 Terc-201ENSMUST00000082862 423 ntBASIC37.41■■■■□ 3.58
Pabpn1Q8CCS6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
Pabpn1Q8CCS6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
Pabpn1Q8CCS6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
Pabpn1Q8CCS6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
Pabpn1Q8CCS6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC37.38■■■■□ 3.58
Pabpn1Q8CCS6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Pabpn1Q8CCS6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
Pabpn1Q8CCS6 Gm13241-201ENSMUST00000094493 780 ntBASIC37.36■■■■□ 3.57
Pabpn1Q8CCS6 Slc35b2-207ENSMUST00000226086 850 ntBASIC37.35■■■■□ 3.57
Pabpn1Q8CCS6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC37.33■■■■□ 3.57
Pabpn1Q8CCS6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC37.33■■■■□ 3.57
Pabpn1Q8CCS6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
Pabpn1Q8CCS6 Gm2415-204ENSMUST00000190235 2004 ntBASIC37.32■■■■□ 3.57
Pabpn1Q8CCS6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC37.32■■■■□ 3.56
Pabpn1Q8CCS6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Pabpn1Q8CCS6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Pabpn1Q8CCS6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
Pabpn1Q8CCS6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Pabpn1Q8CCS6 Gm43034-201ENSMUST00000198678 1364 ntBASIC37.29■■■■□ 3.56
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms