Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC29.42■■■□□ 2.3
Ccdc60Q8C4J0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ccdc60Q8C4J0 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.41■■■□□ 2.3
Ccdc60Q8C4J0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ccdc60Q8C4J0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ccdc60Q8C4J0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ccdc60Q8C4J0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Ccdc60Q8C4J0 Gm4419-202ENSMUST00000226239 1431 ntBASIC29.39■■■□□ 2.3
Ccdc60Q8C4J0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Ccdc60Q8C4J0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
Ccdc60Q8C4J0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Ccdc60Q8C4J0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ccdc60Q8C4J0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.38■■■□□ 2.29
Ccdc60Q8C4J0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ccdc60Q8C4J0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ccdc60Q8C4J0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Ccdc60Q8C4J0 Mir3960-201ENSMUST00000198213 73 ntBASIC29.36■■■□□ 2.29
Ccdc60Q8C4J0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC29.36■■■□□ 2.29
Ccdc60Q8C4J0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ccdc60Q8C4J0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Ccdc60Q8C4J0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Ccdc60Q8C4J0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ccdc60Q8C4J0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ccdc60Q8C4J0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Gm45364-201ENSMUST00000210883 159 ntBASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ccdc60Q8C4J0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ccdc60Q8C4J0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ccdc60Q8C4J0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ccdc60Q8C4J0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ccdc60Q8C4J0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.32■■■□□ 2.28
Ccdc60Q8C4J0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
Ccdc60Q8C4J0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ccdc60Q8C4J0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.3■■■□□ 2.28
Ccdc60Q8C4J0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ccdc60Q8C4J0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ccdc60Q8C4J0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Ccdc60Q8C4J0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ccdc60Q8C4J0 Gm6311-201ENSMUST00000073790 878 ntBASIC29.28■■■□□ 2.28
Ccdc60Q8C4J0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ccdc60Q8C4J0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Ccdc60Q8C4J0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Ccdc60Q8C4J0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ccdc60Q8C4J0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ccdc60Q8C4J0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.26■■■□□ 2.27
Ccdc60Q8C4J0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ccdc60Q8C4J0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ccdc60Q8C4J0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
Ccdc60Q8C4J0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc60Q8C4J0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC29.25■■■□□ 2.27
Ccdc60Q8C4J0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.25■■■□□ 2.27
Ccdc60Q8C4J0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc60Q8C4J0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc60Q8C4J0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc60Q8C4J0 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.24■■■□□ 2.27
Ccdc60Q8C4J0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc60Q8C4J0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc60Q8C4J0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
Ccdc60Q8C4J0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc60Q8C4J0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc60Q8C4J0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC29.22■■■□□ 2.27
Ccdc60Q8C4J0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ccdc60Q8C4J0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ccdc60Q8C4J0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Ccdc60Q8C4J0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ccdc60Q8C4J0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ccdc60Q8C4J0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.21■■■□□ 2.27
Ccdc60Q8C4J0 Gm9812-201ENSMUST00000061934 968 ntBASIC29.21■■■□□ 2.27
Ccdc60Q8C4J0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ccdc60Q8C4J0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC29.21■■■□□ 2.27
Ccdc60Q8C4J0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Ccdc60Q8C4J0 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.2■■■□□ 2.26
Ccdc60Q8C4J0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ccdc60Q8C4J0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC29.2■■■□□ 2.26
Ccdc60Q8C4J0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
Ccdc60Q8C4J0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ccdc60Q8C4J0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.19■■■□□ 2.26
Ccdc60Q8C4J0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ccdc60Q8C4J0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Ccdc60Q8C4J0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc60Q8C4J0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc60Q8C4J0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29.18■■■□□ 2.26
Ccdc60Q8C4J0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc60Q8C4J0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc60Q8C4J0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc60Q8C4J0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc60Q8C4J0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc60Q8C4J0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc60Q8C4J0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Ccdc60Q8C4J0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.14■■■□□ 2.26
Ccdc60Q8C4J0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ccdc60Q8C4J0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ccdc60Q8C4J0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms