Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Usp44Q8C2S0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Usp44Q8C2S0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Usp44Q8C2S0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Usp44Q8C2S0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Usp44Q8C2S0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Usp44Q8C2S0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Usp44Q8C2S0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.22■■□□□ 1.95
Usp44Q8C2S0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.22■■□□□ 1.95
Usp44Q8C2S0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Usp44Q8C2S0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
Usp44Q8C2S0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Usp44Q8C2S0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Usp44Q8C2S0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Usp44Q8C2S0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.2■■□□□ 1.95
Usp44Q8C2S0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Usp44Q8C2S0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.2■■□□□ 1.95
Usp44Q8C2S0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Usp44Q8C2S0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Usp44Q8C2S0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Usp44Q8C2S0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Usp44Q8C2S0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Usp44Q8C2S0 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.19■■□□□ 1.94
Usp44Q8C2S0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Usp44Q8C2S0 Gm4799-201ENSMUST00000095396 657 ntBASIC27.18■■□□□ 1.94
Usp44Q8C2S0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Usp44Q8C2S0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Usp44Q8C2S0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Usp44Q8C2S0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Usp44Q8C2S0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Usp44Q8C2S0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Usp44Q8C2S0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
Usp44Q8C2S0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Usp44Q8C2S0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Usp44Q8C2S0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Usp44Q8C2S0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Usp44Q8C2S0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.14■■□□□ 1.94
Usp44Q8C2S0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Usp44Q8C2S0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Usp44Q8C2S0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Usp44Q8C2S0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Usp44Q8C2S0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Usp44Q8C2S0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Usp44Q8C2S0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Usp44Q8C2S0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Usp44Q8C2S0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Usp44Q8C2S0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Usp44Q8C2S0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Usp44Q8C2S0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.11■■□□□ 1.93
Usp44Q8C2S0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Usp44Q8C2S0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Usp44Q8C2S0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Usp44Q8C2S0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Usp44Q8C2S0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Usp44Q8C2S0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.09■■□□□ 1.93
Usp44Q8C2S0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.09■■□□□ 1.93
Usp44Q8C2S0 Mir3960-201ENSMUST00000198213 73 ntBASIC27.08■■□□□ 1.93
Usp44Q8C2S0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.08■■□□□ 1.93
Usp44Q8C2S0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
Usp44Q8C2S0 Gm45364-201ENSMUST00000210883 159 ntBASIC27.06■■□□□ 1.92
Usp44Q8C2S0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Usp44Q8C2S0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Usp44Q8C2S0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Usp44Q8C2S0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Usp44Q8C2S0 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.05■■□□□ 1.92
Usp44Q8C2S0 Gm9812-201ENSMUST00000061934 968 ntBASIC27.05■■□□□ 1.92
Usp44Q8C2S0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Usp44Q8C2S0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Usp44Q8C2S0 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.04■■□□□ 1.92
Usp44Q8C2S0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.03■■□□□ 1.92
Usp44Q8C2S0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.02■■□□□ 1.92
Usp44Q8C2S0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Usp44Q8C2S0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Usp44Q8C2S0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.01■■□□□ 1.92
Usp44Q8C2S0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Usp44Q8C2S0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Usp44Q8C2S0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27■■□□□ 1.91
Usp44Q8C2S0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27■■□□□ 1.91
Usp44Q8C2S0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.99■■□□□ 1.91
Usp44Q8C2S0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Usp44Q8C2S0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Usp44Q8C2S0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Usp44Q8C2S0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Usp44Q8C2S0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Usp44Q8C2S0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Usp44Q8C2S0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Usp44Q8C2S0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Usp44Q8C2S0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.98■■□□□ 1.91
Usp44Q8C2S0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Usp44Q8C2S0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Usp44Q8C2S0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.97■■□□□ 1.91
Usp44Q8C2S0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Usp44Q8C2S0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Usp44Q8C2S0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Usp44Q8C2S0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.96■■□□□ 1.91
Usp44Q8C2S0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Usp44Q8C2S0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Usp44Q8C2S0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Usp44Q8C2S0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Usp44Q8C2S0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms