Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm5921-201ENSMUST00000075898 882 ntBASIC28.66■■■□□ 2.18
Ptcd1Q8C2E4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptcd1Q8C2E4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.65■■■□□ 2.18
Ptcd1Q8C2E4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptcd1Q8C2E4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptcd1Q8C2E4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptcd1Q8C2E4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ptcd1Q8C2E4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.63■■■□□ 2.17
Ptcd1Q8C2E4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ptcd1Q8C2E4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.62■■■□□ 2.17
Ptcd1Q8C2E4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ptcd1Q8C2E4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ptcd1Q8C2E4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ptcd1Q8C2E4 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.61■■■□□ 2.17
Ptcd1Q8C2E4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ptcd1Q8C2E4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ptcd1Q8C2E4 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.61■■■□□ 2.17
Ptcd1Q8C2E4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptcd1Q8C2E4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28.6■■■□□ 2.17
Ptcd1Q8C2E4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Ptcd1Q8C2E4 Gm15546-201ENSMUST00000122095 826 ntBASIC28.59■■■□□ 2.17
Ptcd1Q8C2E4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ptcd1Q8C2E4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.59■■■□□ 2.17
Ptcd1Q8C2E4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ptcd1Q8C2E4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ptcd1Q8C2E4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC28.58■■■□□ 2.17
Ptcd1Q8C2E4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Ptcd1Q8C2E4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ptcd1Q8C2E4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.56■■■□□ 2.16
Ptcd1Q8C2E4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Ptcd1Q8C2E4 Gm9812-201ENSMUST00000061934 968 ntBASIC28.56■■■□□ 2.16
Ptcd1Q8C2E4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ptcd1Q8C2E4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.55■■■□□ 2.16
Ptcd1Q8C2E4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptcd1Q8C2E4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ptcd1Q8C2E4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ptcd1Q8C2E4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.53■■■□□ 2.16
Ptcd1Q8C2E4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ptcd1Q8C2E4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ptcd1Q8C2E4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ptcd1Q8C2E4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ptcd1Q8C2E4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ptcd1Q8C2E4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
Ptcd1Q8C2E4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ptcd1Q8C2E4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC28.51■■■□□ 2.15
Ptcd1Q8C2E4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.51■■■□□ 2.15
Ptcd1Q8C2E4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ptcd1Q8C2E4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.5■■■□□ 2.15
Ptcd1Q8C2E4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Ptcd1Q8C2E4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Ptcd1Q8C2E4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Ptcd1Q8C2E4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ptcd1Q8C2E4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ptcd1Q8C2E4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ptcd1Q8C2E4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ptcd1Q8C2E4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ptcd1Q8C2E4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Ptcd1Q8C2E4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ptcd1Q8C2E4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ptcd1Q8C2E4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ptcd1Q8C2E4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Ptcd1Q8C2E4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
Ptcd1Q8C2E4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Ptcd1Q8C2E4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ptcd1Q8C2E4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ptcd1Q8C2E4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ptcd1Q8C2E4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Ptcd1Q8C2E4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ptcd1Q8C2E4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Ptcd1Q8C2E4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC28.44■■■□□ 2.14
Ptcd1Q8C2E4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ptcd1Q8C2E4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.43■■■□□ 2.14
Ptcd1Q8C2E4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
Ptcd1Q8C2E4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28.41■■■□□ 2.14
Ptcd1Q8C2E4 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.41■■■□□ 2.14
Ptcd1Q8C2E4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ptcd1Q8C2E4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ptcd1Q8C2E4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Ptcd1Q8C2E4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Ptcd1Q8C2E4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ptcd1Q8C2E4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC28.39■■■□□ 2.14
Ptcd1Q8C2E4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptcd1Q8C2E4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptcd1Q8C2E4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptcd1Q8C2E4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptcd1Q8C2E4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ptcd1Q8C2E4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Ptcd1Q8C2E4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ptcd1Q8C2E4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
Ptcd1Q8C2E4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ptcd1Q8C2E4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ptcd1Q8C2E4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms