Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
ZC3HC1Q86WB0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.06■■□□□ 1.6
ZC3HC1Q86WB0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.06■■□□□ 1.6
ZC3HC1Q86WB0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
ZC3HC1Q86WB0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.06■■□□□ 1.6
ZC3HC1Q86WB0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
ZC3HC1Q86WB0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.04■■□□□ 1.6
ZC3HC1Q86WB0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ZC3HC1Q86WB0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3HC1Q86WB0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3HC1Q86WB0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
ZC3HC1Q86WB0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3HC1Q86WB0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3HC1Q86WB0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3HC1Q86WB0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3HC1Q86WB0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
ZC3HC1Q86WB0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25■■□□□ 1.59
ZC3HC1Q86WB0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ZC3HC1Q86WB0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.98■■□□□ 1.59
ZC3HC1Q86WB0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
ZC3HC1Q86WB0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3HC1Q86WB0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3HC1Q86WB0 AC021231.2-201ENST00000594613 730 ntBASIC24.97■■□□□ 1.59
ZC3HC1Q86WB0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3HC1Q86WB0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3HC1Q86WB0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3HC1Q86WB0 AC110285.7-201ENST00000624417 1536 ntBASIC24.96■■□□□ 1.59
ZC3HC1Q86WB0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3HC1Q86WB0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.95■■□□□ 1.58
ZC3HC1Q86WB0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3HC1Q86WB0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3HC1Q86WB0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3HC1Q86WB0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.94■■□□□ 1.58
ZC3HC1Q86WB0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.93■■□□□ 1.58
ZC3HC1Q86WB0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
ZC3HC1Q86WB0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ZC3HC1Q86WB0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.93■■□□□ 1.58
ZC3HC1Q86WB0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.92■■□□□ 1.58
ZC3HC1Q86WB0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ZC3HC1Q86WB0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
ZC3HC1Q86WB0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.91■■□□□ 1.58
ZC3HC1Q86WB0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.91■■□□□ 1.58
ZC3HC1Q86WB0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.91■■□□□ 1.58
ZC3HC1Q86WB0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
ZC3HC1Q86WB0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
ZC3HC1Q86WB0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 DUX4L29-201ENST00000425409 679 ntBASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3HC1Q86WB0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
ZC3HC1Q86WB0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.89■■□□□ 1.58
ZC3HC1Q86WB0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
ZC3HC1Q86WB0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
ZC3HC1Q86WB0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ZC3HC1Q86WB0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
ZC3HC1Q86WB0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3HC1Q86WB0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3HC1Q86WB0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3HC1Q86WB0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.87■■□□□ 1.57
ZC3HC1Q86WB0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3HC1Q86WB0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3HC1Q86WB0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
ZC3HC1Q86WB0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.86■■□□□ 1.57
ZC3HC1Q86WB0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.86■■□□□ 1.57
ZC3HC1Q86WB0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
ZC3HC1Q86WB0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.85■■□□□ 1.57
ZC3HC1Q86WB0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.85■■□□□ 1.57
ZC3HC1Q86WB0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.85■■□□□ 1.57
ZC3HC1Q86WB0 AL449106.1-201ENST00000608517 1980 ntBASIC24.84■■□□□ 1.57
ZC3HC1Q86WB0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ZC3HC1Q86WB0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ZC3HC1Q86WB0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZC3HC1Q86WB0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3HC1Q86WB0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3HC1Q86WB0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.82■■□□□ 1.56
ZC3HC1Q86WB0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms