Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.37■■■□□ 2.13
RNF180Q86T96 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.37■■■□□ 2.13
RNF180Q86T96 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF180Q86T96 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
RNF180Q86T96 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF180Q86T96 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF180Q86T96 AL592293.1-201ENST00000502889 1188 ntBASIC28.34■■■□□ 2.13
RNF180Q86T96 AC133552.2-201ENST00000619106 1032 ntBASIC28.34■■■□□ 2.13
RNF180Q86T96 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.33■■■□□ 2.13
RNF180Q86T96 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.33■■■□□ 2.13
RNF180Q86T96 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RNF180Q86T96 DUX4L18-201ENST00000553347 1267 ntBASIC28.33■■■□□ 2.13
RNF180Q86T96 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.33■■■□□ 2.13
RNF180Q86T96 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
RNF180Q86T96 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.33■■■□□ 2.12
RNF180Q86T96 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF180Q86T96 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF180Q86T96 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF180Q86T96 AC009831.1-201ENST00000580420 1582 ntBASIC28.32■■■□□ 2.12
RNF180Q86T96 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RNF180Q86T96 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF180Q86T96 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RNF180Q86T96 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNF180Q86T96 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RNF180Q86T96 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RNF180Q86T96 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RNF180Q86T96 SMPD5-203ENST00000639008 1464 ntBASIC28.28■■■□□ 2.12
RNF180Q86T96 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RNF180Q86T96 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
RNF180Q86T96 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.27■■■□□ 2.12
RNF180Q86T96 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.27■■■□□ 2.12
RNF180Q86T96 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
RNF180Q86T96 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.26■■■□□ 2.12
RNF180Q86T96 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.26■■■□□ 2.11
RNF180Q86T96 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF180Q86T96 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RNF180Q86T96 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF180Q86T96 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.25■■■□□ 2.11
RNF180Q86T96 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.25■■■□□ 2.11
RNF180Q86T96 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
RNF180Q86T96 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RNF180Q86T96 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF180Q86T96 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.23■■■□□ 2.11
RNF180Q86T96 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.22■■■□□ 2.11
RNF180Q86T96 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF180Q86T96 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF180Q86T96 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF180Q86T96 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
RNF180Q86T96 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RNF180Q86T96 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF180Q86T96 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RNF180Q86T96 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF180Q86T96 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RNF180Q86T96 AL359258.2-201ENST00000564063 1566 ntBASIC28.21■■■□□ 2.11
RNF180Q86T96 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RNF180Q86T96 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RNF180Q86T96 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.21■■■□□ 2.11
RNF180Q86T96 AL035685.1-201ENST00000636663 812 ntBASIC28.21■■■□□ 2.11
RNF180Q86T96 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.21■■■□□ 2.11
RNF180Q86T96 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
RNF180Q86T96 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RNF180Q86T96 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
RNF180Q86T96 AC026202.3-201ENST00000600805 1127 ntBASIC28.2■■■□□ 2.1
RNF180Q86T96 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
RNF180Q86T96 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.2■■■□□ 2.1
RNF180Q86T96 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RNF180Q86T96 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RNF180Q86T96 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF180Q86T96 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RNF180Q86T96 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF180Q86T96 AP004833.2-201ENST00000532228 1454 ntBASIC28.19■■■□□ 2.1
RNF180Q86T96 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RNF180Q86T96 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNF180Q86T96 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
RNF180Q86T96 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.18■■■□□ 2.1
RNF180Q86T96 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNF180Q86T96 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
RNF180Q86T96 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.17■■■□□ 2.1
RNF180Q86T96 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.17■■■□□ 2.1
RNF180Q86T96 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNF180Q86T96 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
RNF180Q86T96 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.16■■■□□ 2.1
RNF180Q86T96 AL451085.2-201ENST00000605085 799 ntBASIC28.16■■■□□ 2.1
RNF180Q86T96 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RNF180Q86T96 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.15■■■□□ 2.1
RNF180Q86T96 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF180Q86T96 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.15■■■□□ 2.1
RNF180Q86T96 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF180Q86T96 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.15■■■□□ 2.1
RNF180Q86T96 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
RNF180Q86T96 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RNF180Q86T96 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RNF180Q86T96 BHLHE23-202ENST00000612929 1109 ntBASIC28.13■■■□□ 2.09
RNF180Q86T96 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RNF180Q86T96 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
RNF180Q86T96 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.13■■■□□ 2.09
RNF180Q86T96 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RNF180Q86T96 RP9P-202ENST00000450133 1212 ntBASIC28.12■■■□□ 2.09
RNF180Q86T96 AC025884.2-201ENST00000553429 711 ntBASIC28.12■■■□□ 2.09
RNF180Q86T96 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms