Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.9■□□□□ 0.78
Ttc28Q80XJ3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc28Q80XJ3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc28Q80XJ3 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.89■□□□□ 0.77
Ttc28Q80XJ3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ttc28Q80XJ3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ttc28Q80XJ3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc28Q80XJ3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ttc28Q80XJ3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc28Q80XJ3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc28Q80XJ3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.87■□□□□ 0.77
Ttc28Q80XJ3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ttc28Q80XJ3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ttc28Q80XJ3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ttc28Q80XJ3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ttc28Q80XJ3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ttc28Q80XJ3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ttc28Q80XJ3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ttc28Q80XJ3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ttc28Q80XJ3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.85■□□□□ 0.77
Ttc28Q80XJ3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.84■□□□□ 0.77
Ttc28Q80XJ3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ttc28Q80XJ3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ttc28Q80XJ3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Ttc28Q80XJ3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ttc28Q80XJ3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.83■□□□□ 0.77
Ttc28Q80XJ3 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.83■□□□□ 0.76
Ttc28Q80XJ3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ttc28Q80XJ3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.82■□□□□ 0.76
Ttc28Q80XJ3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.82■□□□□ 0.76
Ttc28Q80XJ3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ttc28Q80XJ3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ttc28Q80XJ3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ttc28Q80XJ3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ttc28Q80XJ3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ttc28Q80XJ3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ttc28Q80XJ3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ttc28Q80XJ3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ttc28Q80XJ3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ttc28Q80XJ3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ttc28Q80XJ3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ttc28Q80XJ3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ttc28Q80XJ3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ttc28Q80XJ3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ttc28Q80XJ3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ttc28Q80XJ3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ttc28Q80XJ3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ttc28Q80XJ3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ttc28Q80XJ3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ttc28Q80XJ3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Ttc28Q80XJ3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.76■□□□□ 0.75
Ttc28Q80XJ3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ttc28Q80XJ3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ttc28Q80XJ3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.75■□□□□ 0.75
Ttc28Q80XJ3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ttc28Q80XJ3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ttc28Q80XJ3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ttc28Q80XJ3 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.74■□□□□ 0.75
Ttc28Q80XJ3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.74■□□□□ 0.75
Ttc28Q80XJ3 Terc-201ENSMUST00000082862 423 ntBASIC19.74■□□□□ 0.75
Ttc28Q80XJ3 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ttc28Q80XJ3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc28Q80XJ3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc28Q80XJ3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.7■□□□□ 0.74
Ttc28Q80XJ3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.7■□□□□ 0.74
Ttc28Q80XJ3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.7■□□□□ 0.74
Ttc28Q80XJ3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc28Q80XJ3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Gm43566-201ENSMUST00000196851 808 ntBASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Rps24-207ENSMUST00000224568 714 ntBASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc28Q80XJ3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc28Q80XJ3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc28Q80XJ3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc28Q80XJ3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc28Q80XJ3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc28Q80XJ3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ttc28Q80XJ3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ttc28Q80XJ3 Gm13238-201ENSMUST00000117655 780 ntBASIC19.66■□□□□ 0.74
Ttc28Q80XJ3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc28Q80XJ3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.66■□□□□ 0.74
Ttc28Q80XJ3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc28Q80XJ3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc28Q80XJ3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc28Q80XJ3 Gm45102-201ENSMUST00000207427 857 ntBASIC19.65■□□□□ 0.74
Ttc28Q80XJ3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms