Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh19Q80TF3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh19Q80TF3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh19Q80TF3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.57■■□□□ 1.2
Pcdh19Q80TF3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh19Q80TF3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh19Q80TF3 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.56■■□□□ 1.2
Pcdh19Q80TF3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh19Q80TF3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh19Q80TF3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh19Q80TF3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh19Q80TF3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh19Q80TF3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.54■■□□□ 1.2
Pcdh19Q80TF3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh19Q80TF3 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.54■■□□□ 1.2
Pcdh19Q80TF3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Pcdh19Q80TF3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdh19Q80TF3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
Pcdh19Q80TF3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh19Q80TF3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh19Q80TF3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.52■■□□□ 1.2
Pcdh19Q80TF3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh19Q80TF3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh19Q80TF3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh19Q80TF3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh19Q80TF3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh19Q80TF3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh19Q80TF3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.51■■□□□ 1.19
Pcdh19Q80TF3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Pcdh19Q80TF3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh19Q80TF3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh19Q80TF3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh19Q80TF3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh19Q80TF3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh19Q80TF3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh19Q80TF3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh19Q80TF3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh19Q80TF3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh19Q80TF3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Pcdh19Q80TF3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdh19Q80TF3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh19Q80TF3 Terc-201ENSMUST00000082862 423 ntBASIC22.47■■□□□ 1.19
Pcdh19Q80TF3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh19Q80TF3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh19Q80TF3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh19Q80TF3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh19Q80TF3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Pcdh19Q80TF3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.46■■□□□ 1.19
Pcdh19Q80TF3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh19Q80TF3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh19Q80TF3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh19Q80TF3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.45■■□□□ 1.18
Pcdh19Q80TF3 Gm12366-201ENSMUST00000121722 873 ntBASIC22.45■■□□□ 1.18
Pcdh19Q80TF3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.45■■□□□ 1.18
Pcdh19Q80TF3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh19Q80TF3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.45■■□□□ 1.18
Pcdh19Q80TF3 Gm5786-201ENSMUST00000085368 882 ntBASIC22.45■■□□□ 1.18
Pcdh19Q80TF3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pcdh19Q80TF3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Pcdh19Q80TF3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.44■■□□□ 1.18
Pcdh19Q80TF3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdh19Q80TF3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdh19Q80TF3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh19Q80TF3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh19Q80TF3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh19Q80TF3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh19Q80TF3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh19Q80TF3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh19Q80TF3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh19Q80TF3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh19Q80TF3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh19Q80TF3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh19Q80TF3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Pcdh19Q80TF3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdh19Q80TF3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdh19Q80TF3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh19Q80TF3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh19Q80TF3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh19Q80TF3 Gm27502-201ENSMUST00000183495 199 ntBASIC22.39■■□□□ 1.17
Pcdh19Q80TF3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh19Q80TF3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Pcdh19Q80TF3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdh19Q80TF3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdh19Q80TF3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh19Q80TF3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 203.9 ms