Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Csmd3Q80T79 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Csmd3Q80T79 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Csmd3Q80T79 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Csmd3Q80T79 Gm37136-201ENSMUST00000194368 194 ntBASIC16.31■□□□□ 0.2
Csmd3Q80T79 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Csmd3Q80T79 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Csmd3Q80T79 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Csmd3Q80T79 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.3■□□□□ 0.2
Csmd3Q80T79 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Csmd3Q80T79 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Csmd3Q80T79 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Csmd3Q80T79 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Csmd3Q80T79 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.29■□□□□ 0.2
Csmd3Q80T79 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
Csmd3Q80T79 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.29■□□□□ 0.2
Csmd3Q80T79 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.29■□□□□ 0.2
Csmd3Q80T79 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Csmd3Q80T79 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.29■□□□□ 0.2
Csmd3Q80T79 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Csmd3Q80T79 Gm13238-201ENSMUST00000117655 780 ntBASIC16.28■□□□□ 0.2
Csmd3Q80T79 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.28■□□□□ 0.2
Csmd3Q80T79 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Csmd3Q80T79 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Csmd3Q80T79 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.27■□□□□ 0.2
Csmd3Q80T79 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.27■□□□□ 0.2
Csmd3Q80T79 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Csmd3Q80T79 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csmd3Q80T79 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Csmd3Q80T79 Gm45102-201ENSMUST00000207427 857 ntBASIC16.27■□□□□ 0.19
Csmd3Q80T79 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Csmd3Q80T79 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csmd3Q80T79 Gm14117-201ENSMUST00000122417 843 ntBASIC16.25■□□□□ 0.19
Csmd3Q80T79 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.25■□□□□ 0.19
Csmd3Q80T79 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Csmd3Q80T79 Gm15820-201ENSMUST00000201566 728 ntBASIC16.25■□□□□ 0.19
Csmd3Q80T79 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.25■□□□□ 0.19
Csmd3Q80T79 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.25■□□□□ 0.19
Csmd3Q80T79 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Csmd3Q80T79 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Csmd3Q80T79 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Csmd3Q80T79 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Csmd3Q80T79 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.24■□□□□ 0.19
Csmd3Q80T79 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Csmd3Q80T79 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Csmd3Q80T79 Rps24-207ENSMUST00000224568 714 ntBASIC16.23■□□□□ 0.19
Csmd3Q80T79 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Csmd3Q80T79 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Csmd3Q80T79 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Csmd3Q80T79 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Csmd3Q80T79 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Csmd3Q80T79 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Csmd3Q80T79 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Csmd3Q80T79 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Csmd3Q80T79 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Csmd3Q80T79 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.19■□□□□ 0.18
Csmd3Q80T79 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Csmd3Q80T79 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Csmd3Q80T79 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.19■□□□□ 0.18
Csmd3Q80T79 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Csmd3Q80T79 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Csmd3Q80T79 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Csmd3Q80T79 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Csmd3Q80T79 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Csmd3Q80T79 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Csmd3Q80T79 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Csmd3Q80T79 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Csmd3Q80T79 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Csmd3Q80T79 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Csmd3Q80T79 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Csmd3Q80T79 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Csmd3Q80T79 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Csmd3Q80T79 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.15■□□□□ 0.18
Csmd3Q80T79 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Csmd3Q80T79 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Gm43566-201ENSMUST00000196851 808 ntBASIC16.14■□□□□ 0.17
Csmd3Q80T79 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.14■□□□□ 0.17
Csmd3Q80T79 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms