Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
RGPD4Q7Z3J3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
RGPD4Q7Z3J3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC33.05■■■□□ 2.88
RGPD4Q7Z3J3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC33.05■■■□□ 2.88
RGPD4Q7Z3J3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC33.04■■■□□ 2.88
RGPD4Q7Z3J3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
RGPD4Q7Z3J3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
RGPD4Q7Z3J3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RGPD4Q7Z3J3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC33.02■■■□□ 2.88
RGPD4Q7Z3J3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
RGPD4Q7Z3J3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC33.02■■■□□ 2.88
RGPD4Q7Z3J3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
RGPD4Q7Z3J3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC33.01■■■□□ 2.88
RGPD4Q7Z3J3 THA1P-201ENST00000590384 1145 ntBASIC33.01■■■□□ 2.87
RGPD4Q7Z3J3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RGPD4Q7Z3J3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RGPD4Q7Z3J3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
RGPD4Q7Z3J3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC33■■■□□ 2.87
RGPD4Q7Z3J3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC33■■■□□ 2.87
RGPD4Q7Z3J3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.99■■■□□ 2.87
RGPD4Q7Z3J3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
RGPD4Q7Z3J3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC32.98■■■□□ 2.87
RGPD4Q7Z3J3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
RGPD4Q7Z3J3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
RGPD4Q7Z3J3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.98■■■□□ 2.87
RGPD4Q7Z3J3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
RGPD4Q7Z3J3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RGPD4Q7Z3J3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RGPD4Q7Z3J3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.96■■■□□ 2.87
RGPD4Q7Z3J3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
RGPD4Q7Z3J3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.94■■■□□ 2.86
RGPD4Q7Z3J3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.94■■■□□ 2.86
RGPD4Q7Z3J3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
RGPD4Q7Z3J3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.93■■■□□ 2.86
RGPD4Q7Z3J3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
RGPD4Q7Z3J3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
RGPD4Q7Z3J3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.93■■■□□ 2.86
RGPD4Q7Z3J3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
RGPD4Q7Z3J3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
RGPD4Q7Z3J3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RGPD4Q7Z3J3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RGPD4Q7Z3J3 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.92■■■□□ 2.86
RGPD4Q7Z3J3 AC025884.2-201ENST00000553429 711 ntBASIC32.92■■■□□ 2.86
RGPD4Q7Z3J3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
RGPD4Q7Z3J3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
RGPD4Q7Z3J3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.91■■■□□ 2.86
RGPD4Q7Z3J3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.91■■■□□ 2.86
RGPD4Q7Z3J3 RP9P-202ENST00000450133 1212 ntBASIC32.91■■■□□ 2.86
RGPD4Q7Z3J3 MIR4508-201ENST00000584178 70 ntBASIC32.91■■■□□ 2.86
RGPD4Q7Z3J3 KRT8P33-201ENST00000508125 1423 ntBASIC32.9■■■□□ 2.86
RGPD4Q7Z3J3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.9■■■□□ 2.86
RGPD4Q7Z3J3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC32.89■■■□□ 2.86
RGPD4Q7Z3J3 MIR935-201ENST00000401179 91 ntBASIC32.88■■■□□ 2.85
RGPD4Q7Z3J3 AC074183.2-201ENST00000623112 922 ntBASIC32.88■■■□□ 2.85
RGPD4Q7Z3J3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RGPD4Q7Z3J3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
RGPD4Q7Z3J3 SPCS2P3-201ENST00000500401 656 ntBASIC32.88■■■□□ 2.85
RGPD4Q7Z3J3 AC010980.1-201ENST00000587192 1142 ntBASIC32.88■■■□□ 2.85
RGPD4Q7Z3J3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RGPD4Q7Z3J3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.87■■■□□ 2.85
RGPD4Q7Z3J3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.87■■■□□ 2.85
RGPD4Q7Z3J3 AC026202.3-201ENST00000600805 1127 ntBASIC32.87■■■□□ 2.85
RGPD4Q7Z3J3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC32.86■■■□□ 2.85
RGPD4Q7Z3J3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
RGPD4Q7Z3J3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RGPD4Q7Z3J3 RAP2CP1-202ENST00000605179 643 ntBASIC32.85■■■□□ 2.85
RGPD4Q7Z3J3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.84■■■□□ 2.85
RGPD4Q7Z3J3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.84■■■□□ 2.85
RGPD4Q7Z3J3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.84■■■□□ 2.85
RGPD4Q7Z3J3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RGPD4Q7Z3J3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
RGPD4Q7Z3J3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RGPD4Q7Z3J3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.82■■■□□ 2.84
RGPD4Q7Z3J3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC32.82■■■□□ 2.84
RGPD4Q7Z3J3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
RGPD4Q7Z3J3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.81■■■□□ 2.84
RGPD4Q7Z3J3 AC103834.1-201ENST00000520383 144 ntBASIC32.81■■■□□ 2.84
RGPD4Q7Z3J3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RGPD4Q7Z3J3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RGPD4Q7Z3J3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.8■■■□□ 2.84
RGPD4Q7Z3J3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
RGPD4Q7Z3J3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RGPD4Q7Z3J3 AL356441.2-201ENST00000443009 864 ntBASIC32.79■■■□□ 2.84
RGPD4Q7Z3J3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.79■■■□□ 2.84
RGPD4Q7Z3J3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
RGPD4Q7Z3J3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
RGPD4Q7Z3J3 AC093536.1-201ENST00000569153 554 ntBASIC32.78■■■□□ 2.84
RGPD4Q7Z3J3 PVT1_1.1-201ENST00000615125 194 ntBASIC32.78■■■□□ 2.84
RGPD4Q7Z3J3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
RGPD4Q7Z3J3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
RGPD4Q7Z3J3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RGPD4Q7Z3J3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.76■■■□□ 2.84
RGPD4Q7Z3J3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
RGPD4Q7Z3J3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.84
RGPD4Q7Z3J3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.76■■■□□ 2.83
RGPD4Q7Z3J3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
RGPD4Q7Z3J3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
RGPD4Q7Z3J3 MIR6765-201ENST00000614092 87 ntBASIC32.75■■■□□ 2.83
RGPD4Q7Z3J3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.75■■■□□ 2.83
RGPD4Q7Z3J3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms