Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCXQ7RTU7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCXQ7RTU7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.35■□□□□ 0.21
SCXQ7RTU7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SCXQ7RTU7 AL135925.1-201ENST00000605920 1701 ntBASIC16.34■□□□□ 0.21
SCXQ7RTU7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.34■□□□□ 0.21
SCXQ7RTU7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.34■□□□□ 0.21
SCXQ7RTU7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SCXQ7RTU7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SCXQ7RTU7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC16.34■□□□□ 0.21
SCXQ7RTU7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SCXQ7RTU7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCXQ7RTU7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCXQ7RTU7 WHAMMP2-203ENST00000563942 1603 ntBASIC16.33■□□□□ 0.2
SCXQ7RTU7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCXQ7RTU7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCXQ7RTU7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCXQ7RTU7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SCXQ7RTU7 AC135983.2-203ENST00000454486 1613 ntBASIC16.32■□□□□ 0.2
SCXQ7RTU7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCXQ7RTU7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCXQ7RTU7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCXQ7RTU7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SCXQ7RTU7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCXQ7RTU7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SCXQ7RTU7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCXQ7RTU7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCXQ7RTU7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCXQ7RTU7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCXQ7RTU7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCXQ7RTU7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCXQ7RTU7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
SCXQ7RTU7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCXQ7RTU7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCXQ7RTU7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.3■□□□□ 0.2
SCXQ7RTU7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCXQ7RTU7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCXQ7RTU7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCXQ7RTU7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SCXQ7RTU7 GPX1-201ENST00000419349 1106 ntBASIC16.29■□□□□ 0.2
SCXQ7RTU7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCXQ7RTU7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCXQ7RTU7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCXQ7RTU7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCXQ7RTU7 RARRES2P2-201ENST00000394842 485 ntBASIC16.28■□□□□ 0.2
SCXQ7RTU7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCXQ7RTU7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCXQ7RTU7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCXQ7RTU7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.27■□□□□ 0.2
SCXQ7RTU7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.27■□□□□ 0.2
SCXQ7RTU7 AC008813.1-201ENST00000536597 885 ntBASIC16.27■□□□□ 0.2
SCXQ7RTU7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SCXQ7RTU7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCXQ7RTU7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCXQ7RTU7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.26■□□□□ 0.19
SCXQ7RTU7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCXQ7RTU7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.26■□□□□ 0.19
SCXQ7RTU7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.26■□□□□ 0.19
SCXQ7RTU7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCXQ7RTU7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.26■□□□□ 0.19
SCXQ7RTU7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCXQ7RTU7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCXQ7RTU7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCXQ7RTU7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCXQ7RTU7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SCXQ7RTU7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCXQ7RTU7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC16.25■□□□□ 0.19
SCXQ7RTU7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCXQ7RTU7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.25■□□□□ 0.19
SCXQ7RTU7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.24■□□□□ 0.19
SCXQ7RTU7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.24■□□□□ 0.19
SCXQ7RTU7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.24■□□□□ 0.19
SCXQ7RTU7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.24■□□□□ 0.19
SCXQ7RTU7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.24■□□□□ 0.19
SCXQ7RTU7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.24■□□□□ 0.19
SCXQ7RTU7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCXQ7RTU7 AC110285.7-201ENST00000624417 1536 ntBASIC16.24■□□□□ 0.19
SCXQ7RTU7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCXQ7RTU7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCXQ7RTU7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.23■□□□□ 0.19
SCXQ7RTU7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCXQ7RTU7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCXQ7RTU7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCXQ7RTU7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCXQ7RTU7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCXQ7RTU7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCXQ7RTU7 ABHD17AP5-201ENST00000580133 923 ntBASIC16.22■□□□□ 0.19
SCXQ7RTU7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCXQ7RTU7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCXQ7RTU7 RNF126P1-201ENST00000567452 1320 ntBASIC16.21■□□□□ 0.19
SCXQ7RTU7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
SCXQ7RTU7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SCXQ7RTU7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms