Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Lsm8Q6ZWM4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Lsm8Q6ZWM4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Lsm8Q6ZWM4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Lsm8Q6ZWM4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.22■■□□□ 1.47
Lsm8Q6ZWM4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lsm8Q6ZWM4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lsm8Q6ZWM4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lsm8Q6ZWM4 Gm11599-201ENSMUST00000118720 878 ntBASIC24.2■■□□□ 1.46
Lsm8Q6ZWM4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Lsm8Q6ZWM4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lsm8Q6ZWM4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Lsm8Q6ZWM4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.19■■□□□ 1.46
Lsm8Q6ZWM4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lsm8Q6ZWM4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Lsm8Q6ZWM4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.17■■□□□ 1.46
Lsm8Q6ZWM4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Lsm8Q6ZWM4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Lsm8Q6ZWM4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Lsm8Q6ZWM4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Lsm8Q6ZWM4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Lsm8Q6ZWM4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.15■■□□□ 1.46
Lsm8Q6ZWM4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lsm8Q6ZWM4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lsm8Q6ZWM4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.15■■□□□ 1.46
Lsm8Q6ZWM4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Lsm8Q6ZWM4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Lsm8Q6ZWM4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Lsm8Q6ZWM4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Lsm8Q6ZWM4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lsm8Q6ZWM4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lsm8Q6ZWM4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lsm8Q6ZWM4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Lsm8Q6ZWM4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm8Q6ZWM4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm8Q6ZWM4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm8Q6ZWM4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm8Q6ZWM4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Lsm8Q6ZWM4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm8Q6ZWM4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Lsm8Q6ZWM4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Lsm8Q6ZWM4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Lsm8Q6ZWM4 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.12■■□□□ 1.45
Lsm8Q6ZWM4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Lsm8Q6ZWM4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Lsm8Q6ZWM4 Gm4799-201ENSMUST00000095396 657 ntBASIC24.1■■□□□ 1.45
Lsm8Q6ZWM4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lsm8Q6ZWM4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Lsm8Q6ZWM4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.09■■□□□ 1.45
Lsm8Q6ZWM4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.09■■□□□ 1.45
Lsm8Q6ZWM4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lsm8Q6ZWM4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.09■■□□□ 1.45
Lsm8Q6ZWM4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Lsm8Q6ZWM4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lsm8Q6ZWM4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.08■■□□□ 1.45
Lsm8Q6ZWM4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Lsm8Q6ZWM4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.07■■□□□ 1.44
Lsm8Q6ZWM4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Lsm8Q6ZWM4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Lsm8Q6ZWM4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lsm8Q6ZWM4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Lsm8Q6ZWM4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Lsm8Q6ZWM4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lsm8Q6ZWM4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Lsm8Q6ZWM4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lsm8Q6ZWM4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Lsm8Q6ZWM4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lsm8Q6ZWM4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Lsm8Q6ZWM4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Lsm8Q6ZWM4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Lsm8Q6ZWM4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Lsm8Q6ZWM4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Lsm8Q6ZWM4 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.02■■□□□ 1.44
Lsm8Q6ZWM4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lsm8Q6ZWM4 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.01■■□□□ 1.43
Lsm8Q6ZWM4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Lsm8Q6ZWM4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Lsm8Q6ZWM4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Lsm8Q6ZWM4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24■■□□□ 1.43
Lsm8Q6ZWM4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Lsm8Q6ZWM4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lsm8Q6ZWM4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lsm8Q6ZWM4 Mir3960-201ENSMUST00000198213 73 ntBASIC23.99■■□□□ 1.43
Lsm8Q6ZWM4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lsm8Q6ZWM4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lsm8Q6ZWM4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Lsm8Q6ZWM4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Lsm8Q6ZWM4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Lsm8Q6ZWM4 Gm9812-201ENSMUST00000061934 968 ntBASIC23.98■■□□□ 1.43
Lsm8Q6ZWM4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lsm8Q6ZWM4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lsm8Q6ZWM4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Lsm8Q6ZWM4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
Lsm8Q6ZWM4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Lsm8Q6ZWM4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Lsm8Q6ZWM4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lsm8Q6ZWM4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lsm8Q6ZWM4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Lsm8Q6ZWM4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Lsm8Q6ZWM4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms