Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.53■■■□□ 2.16
SHC4Q6S5L8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SHC4Q6S5L8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
SHC4Q6S5L8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SHC4Q6S5L8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
SHC4Q6S5L8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
SHC4Q6S5L8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
SHC4Q6S5L8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SHC4Q6S5L8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
SHC4Q6S5L8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SHC4Q6S5L8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.49■■■□□ 2.15
SHC4Q6S5L8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SHC4Q6S5L8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.49■■■□□ 2.15
SHC4Q6S5L8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.48■■■□□ 2.15
SHC4Q6S5L8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SHC4Q6S5L8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SHC4Q6S5L8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.47■■■□□ 2.15
SHC4Q6S5L8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
SHC4Q6S5L8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SHC4Q6S5L8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.47■■■□□ 2.15
SHC4Q6S5L8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SHC4Q6S5L8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
SHC4Q6S5L8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SHC4Q6S5L8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.46■■■□□ 2.15
SHC4Q6S5L8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SHC4Q6S5L8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.45■■■□□ 2.15
SHC4Q6S5L8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
SHC4Q6S5L8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SHC4Q6S5L8 AC110285.7-201ENST00000624417 1536 ntBASIC28.44■■■□□ 2.14
SHC4Q6S5L8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.44■■■□□ 2.14
SHC4Q6S5L8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
SHC4Q6S5L8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SHC4Q6S5L8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.43■■■□□ 2.14
SHC4Q6S5L8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SHC4Q6S5L8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SHC4Q6S5L8 DUX4L29-201ENST00000425409 679 ntBASIC28.41■■■□□ 2.14
SHC4Q6S5L8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SHC4Q6S5L8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.41■■■□□ 2.14
SHC4Q6S5L8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.4■■■□□ 2.14
SHC4Q6S5L8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SHC4Q6S5L8 RPS2P35-201ENST00000443417 897 ntBASIC28.4■■■□□ 2.14
SHC4Q6S5L8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SHC4Q6S5L8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SHC4Q6S5L8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SHC4Q6S5L8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SHC4Q6S5L8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SHC4Q6S5L8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.14
SHC4Q6S5L8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.39■■■□□ 2.14
SHC4Q6S5L8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
SHC4Q6S5L8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
SHC4Q6S5L8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.38■■■□□ 2.13
SHC4Q6S5L8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.38■■■□□ 2.13
SHC4Q6S5L8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SHC4Q6S5L8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SHC4Q6S5L8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
SHC4Q6S5L8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SHC4Q6S5L8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.36■■■□□ 2.13
SHC4Q6S5L8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SHC4Q6S5L8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SHC4Q6S5L8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.36■■■□□ 2.13
SHC4Q6S5L8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SHC4Q6S5L8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
SHC4Q6S5L8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.36■■■□□ 2.13
SHC4Q6S5L8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
SHC4Q6S5L8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
SHC4Q6S5L8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SHC4Q6S5L8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.34■■■□□ 2.13
SHC4Q6S5L8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SHC4Q6S5L8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.33■■■□□ 2.13
SHC4Q6S5L8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHC4Q6S5L8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
SHC4Q6S5L8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.32■■■□□ 2.12
SHC4Q6S5L8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.31■■■□□ 2.12
SHC4Q6S5L8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.31■■■□□ 2.12
SHC4Q6S5L8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SHC4Q6S5L8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.3■■■□□ 2.12
SHC4Q6S5L8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.3■■■□□ 2.12
SHC4Q6S5L8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SHC4Q6S5L8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.3■■■□□ 2.12
SHC4Q6S5L8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.3■■■□□ 2.12
SHC4Q6S5L8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
SHC4Q6S5L8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SHC4Q6S5L8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
SHC4Q6S5L8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHC4Q6S5L8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SHC4Q6S5L8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SHC4Q6S5L8 AL449106.1-201ENST00000608517 1980 ntBASIC28.28■■■□□ 2.12
SHC4Q6S5L8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHC4Q6S5L8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SHC4Q6S5L8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SHC4Q6S5L8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.27■■■□□ 2.12
SHC4Q6S5L8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SHC4Q6S5L8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms