Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.15■□□□□ 0.82
Slc46a1Q6PEM8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc46a1Q6PEM8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc46a1Q6PEM8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc46a1Q6PEM8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a1Q6PEM8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a1Q6PEM8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a1Q6PEM8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.13■□□□□ 0.81
Slc46a1Q6PEM8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a1Q6PEM8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Slc46a1Q6PEM8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc46a1Q6PEM8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc46a1Q6PEM8 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.11■□□□□ 0.81
Slc46a1Q6PEM8 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.11■□□□□ 0.81
Slc46a1Q6PEM8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a1Q6PEM8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a1Q6PEM8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a1Q6PEM8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.11■□□□□ 0.81
Slc46a1Q6PEM8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.1■□□□□ 0.81
Slc46a1Q6PEM8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc46a1Q6PEM8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc46a1Q6PEM8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Slc46a1Q6PEM8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Slc46a1Q6PEM8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a1Q6PEM8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a1Q6PEM8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a1Q6PEM8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.08■□□□□ 0.81
Slc46a1Q6PEM8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a1Q6PEM8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a1Q6PEM8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a1Q6PEM8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc46a1Q6PEM8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Gm12366-201ENSMUST00000121722 873 ntBASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Gm5786-201ENSMUST00000085368 882 ntBASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Slc46a1Q6PEM8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a1Q6PEM8 Gm27502-201ENSMUST00000183495 199 ntBASIC20.06■□□□□ 0.8
Slc46a1Q6PEM8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a1Q6PEM8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a1Q6PEM8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a1Q6PEM8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.06■□□□□ 0.8
Slc46a1Q6PEM8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a1Q6PEM8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a1Q6PEM8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a1Q6PEM8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a1Q6PEM8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Gm9812-201ENSMUST00000061934 968 ntBASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.04■□□□□ 0.8
Slc46a1Q6PEM8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a1Q6PEM8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a1Q6PEM8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a1Q6PEM8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a1Q6PEM8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.02■□□□□ 0.8
Slc46a1Q6PEM8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.02■□□□□ 0.8
Slc46a1Q6PEM8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a1Q6PEM8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc46a1Q6PEM8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20■□□□□ 0.79
Slc46a1Q6PEM8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a1Q6PEM8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a1Q6PEM8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a1Q6PEM8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a1Q6PEM8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a1Q6PEM8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a1Q6PEM8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a1Q6PEM8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.97■□□□□ 0.79
Slc46a1Q6PEM8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc46a1Q6PEM8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc46a1Q6PEM8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.96■□□□□ 0.79
Slc46a1Q6PEM8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc46a1Q6PEM8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms