Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Chd4Q6PDQ2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Chd4Q6PDQ2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Chd4Q6PDQ2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Chd4Q6PDQ2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Chd4Q6PDQ2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chd4Q6PDQ2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chd4Q6PDQ2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Chd4Q6PDQ2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.07■■■□□ 2.56
Chd4Q6PDQ2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC31.07■■■□□ 2.56
Chd4Q6PDQ2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.07■■■□□ 2.56
Chd4Q6PDQ2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Chd4Q6PDQ2 Gm14523-201ENSMUST00000117260 558 ntBASIC31.06■■■□□ 2.56
Chd4Q6PDQ2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Chd4Q6PDQ2 Terc-201ENSMUST00000082862 423 ntBASIC31.06■■■□□ 2.56
Chd4Q6PDQ2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Chd4Q6PDQ2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Chd4Q6PDQ2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.04■■■□□ 2.56
Chd4Q6PDQ2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC31.02■■■□□ 2.56
Chd4Q6PDQ2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Chd4Q6PDQ2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Chd4Q6PDQ2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Chd4Q6PDQ2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Chd4Q6PDQ2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.01■■■□□ 2.55
Chd4Q6PDQ2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Chd4Q6PDQ2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Chd4Q6PDQ2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.99■■■□□ 2.55
Chd4Q6PDQ2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Chd4Q6PDQ2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.98■■■□□ 2.55
Chd4Q6PDQ2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Chd4Q6PDQ2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Chd4Q6PDQ2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Chd4Q6PDQ2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Chd4Q6PDQ2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.97■■■□□ 2.55
Chd4Q6PDQ2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Chd4Q6PDQ2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Chd4Q6PDQ2 AC153911.1-201ENSMUST00000220378 758 ntBASIC30.95■■■□□ 2.55
Chd4Q6PDQ2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.95■■■□□ 2.55
Chd4Q6PDQ2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Chd4Q6PDQ2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Chd4Q6PDQ2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Chd4Q6PDQ2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.95■■■□□ 2.54
Chd4Q6PDQ2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30.94■■■□□ 2.54
Chd4Q6PDQ2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Chd4Q6PDQ2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Chd4Q6PDQ2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.94■■■□□ 2.54
Chd4Q6PDQ2 Gm10420-201ENSMUST00000121713 882 ntBASIC30.94■■■□□ 2.54
Chd4Q6PDQ2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Chd4Q6PDQ2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Chd4Q6PDQ2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Chd4Q6PDQ2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Chd4Q6PDQ2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Chd4Q6PDQ2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Chd4Q6PDQ2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Chd4Q6PDQ2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Chd4Q6PDQ2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Chd4Q6PDQ2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.9■■■□□ 2.54
Chd4Q6PDQ2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.89■■■□□ 2.54
Chd4Q6PDQ2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
Chd4Q6PDQ2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Chd4Q6PDQ2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30.88■■■□□ 2.53
Chd4Q6PDQ2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.88■■■□□ 2.53
Chd4Q6PDQ2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Chd4Q6PDQ2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Chd4Q6PDQ2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Chd4Q6PDQ2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Chd4Q6PDQ2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Chd4Q6PDQ2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
Chd4Q6PDQ2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Chd4Q6PDQ2 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.84■■■□□ 2.53
Chd4Q6PDQ2 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.84■■■□□ 2.53
Chd4Q6PDQ2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30.84■■■□□ 2.53
Chd4Q6PDQ2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Gm4419-202ENSMUST00000226239 1431 ntBASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Chd4Q6PDQ2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Chd4Q6PDQ2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Chd4Q6PDQ2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.81■■■□□ 2.52
Chd4Q6PDQ2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.81■■■□□ 2.52
Chd4Q6PDQ2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Chd4Q6PDQ2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Chd4Q6PDQ2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Chd4Q6PDQ2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Chd4Q6PDQ2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Chd4Q6PDQ2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Chd4Q6PDQ2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Chd4Q6PDQ2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30.79■■■□□ 2.52
Chd4Q6PDQ2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30.79■■■□□ 2.52
Chd4Q6PDQ2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Chd4Q6PDQ2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC30.77■■■□□ 2.52
Chd4Q6PDQ2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Chd4Q6PDQ2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Chd4Q6PDQ2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Chd4Q6PDQ2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30.75■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms