Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcfc1Q61191 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc1Q61191 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.98■□□□□ 0.79
Hcfc1Q61191 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc1Q61191 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc1Q61191 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc1Q61191 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.97■□□□□ 0.79
Hcfc1Q61191 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Hcfc1Q61191 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcfc1Q61191 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.96■□□□□ 0.79
Hcfc1Q61191 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hcfc1Q61191 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hcfc1Q61191 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hcfc1Q61191 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hcfc1Q61191 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcfc1Q61191 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hcfc1Q61191 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcfc1Q61191 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcfc1Q61191 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcfc1Q61191 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.93■□□□□ 0.78
Hcfc1Q61191 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcfc1Q61191 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.93■□□□□ 0.78
Hcfc1Q61191 Gm22567-201ENSMUST00000175542 342 ntBASIC19.93■□□□□ 0.78
Hcfc1Q61191 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcfc1Q61191 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hcfc1Q61191 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcfc1Q61191 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Hcfc1Q61191 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcfc1Q61191 Zxda-201ENSMUST00000117281 2621 ntBASIC19.91■□□□□ 0.78
Hcfc1Q61191 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcfc1Q61191 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcfc1Q61191 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcfc1Q61191 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.9■□□□□ 0.78
Hcfc1Q61191 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcfc1Q61191 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hcfc1Q61191 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcfc1Q61191 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcfc1Q61191 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcfc1Q61191 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcfc1Q61191 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hcfc1Q61191 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hcfc1Q61191 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Hcfc1Q61191 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hcfc1Q61191 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.85■□□□□ 0.77
Hcfc1Q61191 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hcfc1Q61191 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hcfc1Q61191 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hcfc1Q61191 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcfc1Q61191 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcfc1Q61191 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hcfc1Q61191 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Hcfc1Q61191 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hcfc1Q61191 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hcfc1Q61191 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.82■□□□□ 0.76
Hcfc1Q61191 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.82■□□□□ 0.76
Hcfc1Q61191 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.81■□□□□ 0.76
Hcfc1Q61191 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.81■□□□□ 0.76
Hcfc1Q61191 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcfc1Q61191 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcfc1Q61191 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.81■□□□□ 0.76
Hcfc1Q61191 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcfc1Q61191 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hcfc1Q61191 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcfc1Q61191 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.8■□□□□ 0.76
Hcfc1Q61191 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Hcfc1Q61191 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcfc1Q61191 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcfc1Q61191 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcfc1Q61191 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.79■□□□□ 0.76
Hcfc1Q61191 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hcfc1Q61191 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcfc1Q61191 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hcfc1Q61191 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hcfc1Q61191 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.77■□□□□ 0.76
Hcfc1Q61191 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hcfc1Q61191 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.77■□□□□ 0.76
Hcfc1Q61191 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Hcfc1Q61191 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hcfc1Q61191 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hcfc1Q61191 Gm15546-201ENSMUST00000122095 826 ntBASIC19.76■□□□□ 0.75
Hcfc1Q61191 Gm44428-201ENSMUST00000204474 874 ntBASIC19.76■□□□□ 0.75
Hcfc1Q61191 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.76■□□□□ 0.75
Hcfc1Q61191 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hcfc1Q61191 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hcfc1Q61191 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcfc1Q61191 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hcfc1Q61191 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcfc1Q61191 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcfc1Q61191 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1Q61191 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1Q61191 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1Q61191 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1Q61191 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1Q61191 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.73■□□□□ 0.75
Hcfc1Q61191 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hcfc1Q61191 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hcfc1Q61191 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Hcfc1Q61191 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcfc1Q61191 Gm43566-201ENSMUST00000196851 808 ntBASIC19.73■□□□□ 0.75
Hcfc1Q61191 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms