Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scarb1Q61009 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scarb1Q61009 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarb1Q61009 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarb1Q61009 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarb1Q61009 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.26■□□□□ 0.67
Scarb1Q61009 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarb1Q61009 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scarb1Q61009 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarb1Q61009 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb1Q61009 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb1Q61009 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scarb1Q61009 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb1Q61009 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb1Q61009 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb1Q61009 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.24■□□□□ 0.67
Scarb1Q61009 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb1Q61009 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb1Q61009 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb1Q61009 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.24■□□□□ 0.67
Scarb1Q61009 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb1Q61009 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.24■□□□□ 0.67
Scarb1Q61009 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Scarb1Q61009 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb1Q61009 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb1Q61009 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb1Q61009 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb1Q61009 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Scarb1Q61009 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb1Q61009 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scarb1Q61009 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb1Q61009 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarb1Q61009 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Scarb1Q61009 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Scarb1Q61009 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Scarb1Q61009 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Scarb1Q61009 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.22■□□□□ 0.67
Scarb1Q61009 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarb1Q61009 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb1Q61009 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb1Q61009 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Scarb1Q61009 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb1Q61009 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb1Q61009 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb1Q61009 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb1Q61009 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.2■□□□□ 0.66
Scarb1Q61009 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb1Q61009 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb1Q61009 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb1Q61009 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Scarb1Q61009 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarb1Q61009 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scarb1Q61009 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scarb1Q61009 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.18■□□□□ 0.66
Scarb1Q61009 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb1Q61009 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scarb1Q61009 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb1Q61009 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb1Q61009 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb1Q61009 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.17■□□□□ 0.66
Scarb1Q61009 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb1Q61009 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.17■□□□□ 0.66
Scarb1Q61009 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarb1Q61009 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.16■□□□□ 0.66
Scarb1Q61009 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.15■□□□□ 0.66
Scarb1Q61009 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scarb1Q61009 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scarb1Q61009 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scarb1Q61009 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarb1Q61009 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scarb1Q61009 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarb1Q61009 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.13■□□□□ 0.65
Scarb1Q61009 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarb1Q61009 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarb1Q61009 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scarb1Q61009 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scarb1Q61009 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarb1Q61009 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarb1Q61009 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarb1Q61009 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Scarb1Q61009 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scarb1Q61009 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scarb1Q61009 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.11■□□□□ 0.65
Scarb1Q61009 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.11■□□□□ 0.65
Scarb1Q61009 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.11■□□□□ 0.65
Scarb1Q61009 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.11■□□□□ 0.65
Scarb1Q61009 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.11■□□□□ 0.65
Scarb1Q61009 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scarb1Q61009 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scarb1Q61009 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scarb1Q61009 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scarb1Q61009 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Scarb1Q61009 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Scarb1Q61009 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scarb1Q61009 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scarb1Q61009 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scarb1Q61009 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scarb1Q61009 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scarb1Q61009 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scarb1Q61009 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms