Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Col12a1Q60847 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Col12a1Q60847 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col12a1Q60847 Gm37136-201ENSMUST00000194368 194 ntBASIC23.7■■□□□ 1.38
Col12a1Q60847 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Col12a1Q60847 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col12a1Q60847 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col12a1Q60847 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col12a1Q60847 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Col12a1Q60847 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col12a1Q60847 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.67■■□□□ 1.38
Col12a1Q60847 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Col12a1Q60847 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col12a1Q60847 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.67■■□□□ 1.38
Col12a1Q60847 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Col12a1Q60847 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col12a1Q60847 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col12a1Q60847 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col12a1Q60847 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.65■■□□□ 1.38
Col12a1Q60847 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.65■■□□□ 1.38
Col12a1Q60847 Gm9812-201ENSMUST00000061934 968 ntBASIC23.64■■□□□ 1.38
Col12a1Q60847 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Col12a1Q60847 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Col12a1Q60847 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.64■■□□□ 1.37
Col12a1Q60847 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col12a1Q60847 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col12a1Q60847 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col12a1Q60847 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Col12a1Q60847 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Col12a1Q60847 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col12a1Q60847 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col12a1Q60847 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col12a1Q60847 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col12a1Q60847 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col12a1Q60847 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col12a1Q60847 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col12a1Q60847 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Col12a1Q60847 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.59■■□□□ 1.37
Col12a1Q60847 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.59■■□□□ 1.37
Col12a1Q60847 Gm9959-201ENSMUST00000068277 390 ntBASIC23.59■■□□□ 1.37
Col12a1Q60847 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.58■■□□□ 1.37
Col12a1Q60847 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.58■■□□□ 1.37
Col12a1Q60847 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col12a1Q60847 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.58■■□□□ 1.37
Col12a1Q60847 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col12a1Q60847 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col12a1Q60847 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col12a1Q60847 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Col12a1Q60847 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.57■■□□□ 1.36
Col12a1Q60847 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Col12a1Q60847 Gm43566-201ENSMUST00000196851 808 ntBASIC23.57■■□□□ 1.36
Col12a1Q60847 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col12a1Q60847 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.56■■□□□ 1.36
Col12a1Q60847 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col12a1Q60847 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.56■■□□□ 1.36
Col12a1Q60847 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col12a1Q60847 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col12a1Q60847 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col12a1Q60847 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.56■■□□□ 1.36
Col12a1Q60847 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col12a1Q60847 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col12a1Q60847 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col12a1Q60847 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
Col12a1Q60847 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col12a1Q60847 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.54■■□□□ 1.36
Col12a1Q60847 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Col12a1Q60847 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col12a1Q60847 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col12a1Q60847 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.53■■□□□ 1.36
Col12a1Q60847 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col12a1Q60847 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col12a1Q60847 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Col12a1Q60847 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col12a1Q60847 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col12a1Q60847 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col12a1Q60847 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col12a1Q60847 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col12a1Q60847 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.52■■□□□ 1.36
Col12a1Q60847 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col12a1Q60847 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col12a1Q60847 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col12a1Q60847 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.5■■□□□ 1.35
Col12a1Q60847 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col12a1Q60847 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col12a1Q60847 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col12a1Q60847 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.48■■□□□ 1.35
Col12a1Q60847 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col12a1Q60847 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col12a1Q60847 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col12a1Q60847 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col12a1Q60847 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Col12a1Q60847 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col12a1Q60847 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Col12a1Q60847 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col12a1Q60847 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col12a1Q60847 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col12a1Q60847 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col12a1Q60847 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Col12a1Q60847 Gm45444-201ENSMUST00000211394 898 ntBASIC23.44■■□□□ 1.34
Col12a1Q60847 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms