Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav5d-4Q5R1F6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trav5d-4Q5R1F6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav5d-4Q5R1F6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav5d-4Q5R1F6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trav5d-4Q5R1F6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav5d-4Q5R1F6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Trav5d-4Q5R1F6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav5d-4Q5R1F6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav5d-4Q5R1F6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.66■□□□□ 0.74
Trav5d-4Q5R1F6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav5d-4Q5R1F6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav5d-4Q5R1F6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav5d-4Q5R1F6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trav5d-4Q5R1F6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5d-4Q5R1F6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5d-4Q5R1F6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trav5d-4Q5R1F6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5d-4Q5R1F6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trav5d-4Q5R1F6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav5d-4Q5R1F6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav5d-4Q5R1F6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav5d-4Q5R1F6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav5d-4Q5R1F6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav5d-4Q5R1F6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav5d-4Q5R1F6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trav5d-4Q5R1F6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav5d-4Q5R1F6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav5d-4Q5R1F6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav5d-4Q5R1F6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav5d-4Q5R1F6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.62■□□□□ 0.73
Trav5d-4Q5R1F6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5d-4Q5R1F6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5d-4Q5R1F6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5d-4Q5R1F6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5d-4Q5R1F6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5d-4Q5R1F6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5d-4Q5R1F6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5d-4Q5R1F6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5d-4Q5R1F6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5d-4Q5R1F6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5d-4Q5R1F6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5d-4Q5R1F6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav5d-4Q5R1F6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav5d-4Q5R1F6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.59■□□□□ 0.73
Trav5d-4Q5R1F6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav5d-4Q5R1F6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav5d-4Q5R1F6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trav5d-4Q5R1F6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav5d-4Q5R1F6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav5d-4Q5R1F6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav5d-4Q5R1F6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav5d-4Q5R1F6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav5d-4Q5R1F6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5d-4Q5R1F6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5d-4Q5R1F6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5d-4Q5R1F6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5d-4Q5R1F6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5d-4Q5R1F6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5d-4Q5R1F6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5d-4Q5R1F6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5d-4Q5R1F6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav5d-4Q5R1F6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav5d-4Q5R1F6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
Trav5d-4Q5R1F6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.55■□□□□ 0.72
Trav5d-4Q5R1F6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5d-4Q5R1F6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5d-4Q5R1F6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5d-4Q5R1F6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav5d-4Q5R1F6 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.52■□□□□ 0.72
Trav5d-4Q5R1F6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav5d-4Q5R1F6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trav5d-4Q5R1F6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav5d-4Q5R1F6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.52■□□□□ 0.71
Trav5d-4Q5R1F6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.51■□□□□ 0.71
Trav5d-4Q5R1F6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav5d-4Q5R1F6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav5d-4Q5R1F6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav5d-4Q5R1F6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav5d-4Q5R1F6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav5d-4Q5R1F6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav5d-4Q5R1F6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav5d-4Q5R1F6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav5d-4Q5R1F6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav5d-4Q5R1F6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav5d-4Q5R1F6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav5d-4Q5R1F6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav5d-4Q5R1F6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav5d-4Q5R1F6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.48■□□□□ 0.71
Trav5d-4Q5R1F6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms