Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.12■■□□□ 1.45
PDCD4Q53EL6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.12■■□□□ 1.45
PDCD4Q53EL6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.12■■□□□ 1.45
PDCD4Q53EL6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDCD4Q53EL6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PDCD4Q53EL6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PDCD4Q53EL6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.11■■□□□ 1.45
PDCD4Q53EL6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.11■■□□□ 1.45
PDCD4Q53EL6 AC108673.1-201ENST00000510422 1159 ntBASIC24.11■■□□□ 1.45
PDCD4Q53EL6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PDCD4Q53EL6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.1■■□□□ 1.45
PDCD4Q53EL6 LINC00273-201ENST00000539813 1452 ntBASIC24.1■■□□□ 1.45
PDCD4Q53EL6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PDCD4Q53EL6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PDCD4Q53EL6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDCD4Q53EL6 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.09■■□□□ 1.45
PDCD4Q53EL6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.09■■□□□ 1.45
PDCD4Q53EL6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PDCD4Q53EL6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDCD4Q53EL6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PDCD4Q53EL6 AL449106.1-201ENST00000608517 1980 ntBASIC24.09■■□□□ 1.45
PDCD4Q53EL6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDCD4Q53EL6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDCD4Q53EL6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.08■■□□□ 1.44
PDCD4Q53EL6 AC091060.1-201ENST00000623524 1766 ntBASIC24.07■■□□□ 1.44
PDCD4Q53EL6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PDCD4Q53EL6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PDCD4Q53EL6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDCD4Q53EL6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDCD4Q53EL6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PDCD4Q53EL6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
PDCD4Q53EL6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDCD4Q53EL6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDCD4Q53EL6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
PDCD4Q53EL6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDCD4Q53EL6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
PDCD4Q53EL6 SUZ12P1-203ENST00000578195 985 ntBASIC24.05■■□□□ 1.44
PDCD4Q53EL6 MIR6090-201ENST00000622481 60 ntBASIC24.05■■□□□ 1.44
PDCD4Q53EL6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDCD4Q53EL6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDCD4Q53EL6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDCD4Q53EL6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.04■■□□□ 1.44
PDCD4Q53EL6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PDCD4Q53EL6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PDCD4Q53EL6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDCD4Q53EL6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PDCD4Q53EL6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.03■■□□□ 1.44
PDCD4Q53EL6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.02■■□□□ 1.44
PDCD4Q53EL6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PDCD4Q53EL6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
PDCD4Q53EL6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDCD4Q53EL6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDCD4Q53EL6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
PDCD4Q53EL6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PDCD4Q53EL6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDCD4Q53EL6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDCD4Q53EL6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24■■□□□ 1.43
PDCD4Q53EL6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24■■□□□ 1.43
PDCD4Q53EL6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDCD4Q53EL6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PDCD4Q53EL6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDCD4Q53EL6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDCD4Q53EL6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
PDCD4Q53EL6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDCD4Q53EL6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDCD4Q53EL6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
PDCD4Q53EL6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.97■■□□□ 1.43
PDCD4Q53EL6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PDCD4Q53EL6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PDCD4Q53EL6 DUX4L28-201ENST00000623687 678 ntBASIC23.96■■□□□ 1.43
PDCD4Q53EL6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDCD4Q53EL6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDCD4Q53EL6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDCD4Q53EL6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDCD4Q53EL6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.94■■□□□ 1.42
PDCD4Q53EL6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDCD4Q53EL6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.94■■□□□ 1.42
PDCD4Q53EL6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.94■■□□□ 1.42
PDCD4Q53EL6 AC145676.1-201ENST00000514988 2004 ntBASIC23.94■■□□□ 1.42
PDCD4Q53EL6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDCD4Q53EL6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.93■■□□□ 1.42
PDCD4Q53EL6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDCD4Q53EL6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.93■■□□□ 1.42
PDCD4Q53EL6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.93■■□□□ 1.42
PDCD4Q53EL6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PDCD4Q53EL6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.93■■□□□ 1.42
PDCD4Q53EL6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.92■■□□□ 1.42
PDCD4Q53EL6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDCD4Q53EL6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDCD4Q53EL6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.9■■□□□ 1.42
PDCD4Q53EL6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDCD4Q53EL6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms