Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.78■■■□□ 2.36
CERKLQ49MI3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CERKLQ49MI3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CERKLQ49MI3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CERKLQ49MI3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.76■■■□□ 2.35
CERKLQ49MI3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.76■■■□□ 2.35
CERKLQ49MI3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CERKLQ49MI3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.76■■■□□ 2.35
CERKLQ49MI3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
CERKLQ49MI3 AC092296.2-201ENST00000589470 999 ntBASIC29.76■■■□□ 2.35
CERKLQ49MI3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CERKLQ49MI3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
CERKLQ49MI3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
CERKLQ49MI3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CERKLQ49MI3 AC126177.7-201ENST00000547904 679 ntBASIC29.75■■■□□ 2.35
CERKLQ49MI3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.74■■■□□ 2.35
CERKLQ49MI3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CERKLQ49MI3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.73■■■□□ 2.35
CERKLQ49MI3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CERKLQ49MI3 NTF6A-201ENST00000591175 560 ntBASIC29.73■■■□□ 2.35
CERKLQ49MI3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.73■■■□□ 2.35
CERKLQ49MI3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CERKLQ49MI3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CERKLQ49MI3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.71■■■□□ 2.35
CERKLQ49MI3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.71■■■□□ 2.35
CERKLQ49MI3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CERKLQ49MI3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.71■■■□□ 2.35
CERKLQ49MI3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.71■■■□□ 2.35
CERKLQ49MI3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CERKLQ49MI3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CERKLQ49MI3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CERKLQ49MI3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
CERKLQ49MI3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CERKLQ49MI3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.69■■■□□ 2.34
CERKLQ49MI3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CERKLQ49MI3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CERKLQ49MI3 ECEL1P2-201ENST00000461596 1295 ntBASIC29.68■■■□□ 2.34
CERKLQ49MI3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CERKLQ49MI3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CERKLQ49MI3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.66■■■□□ 2.34
CERKLQ49MI3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.66■■■□□ 2.34
CERKLQ49MI3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CERKLQ49MI3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CERKLQ49MI3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CERKLQ49MI3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.65■■■□□ 2.34
CERKLQ49MI3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
CERKLQ49MI3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CERKLQ49MI3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.65■■■□□ 2.34
CERKLQ49MI3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
CERKLQ49MI3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CERKLQ49MI3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.64■■■□□ 2.34
CERKLQ49MI3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.64■■■□□ 2.34
CERKLQ49MI3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CERKLQ49MI3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.63■■■□□ 2.33
CERKLQ49MI3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.62■■■□□ 2.33
CERKLQ49MI3 U85056.1-201ENST00000616429 682 ntBASIC29.62■■■□□ 2.33
CERKLQ49MI3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.62■■■□□ 2.33
CERKLQ49MI3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CERKLQ49MI3 AP002414.2-202ENST00000590929 1450 ntBASIC29.61■■■□□ 2.33
CERKLQ49MI3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.61■■■□□ 2.33
CERKLQ49MI3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CERKLQ49MI3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CERKLQ49MI3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CERKLQ49MI3 AL157400.5-201ENST00000507624 621 ntBASIC29.61■■■□□ 2.33
CERKLQ49MI3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CERKLQ49MI3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
CERKLQ49MI3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CERKLQ49MI3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.59■■■□□ 2.33
CERKLQ49MI3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.59■■■□□ 2.33
CERKLQ49MI3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CERKLQ49MI3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CERKLQ49MI3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.58■■■□□ 2.33
CERKLQ49MI3 AL359258.2-201ENST00000564063 1566 ntBASIC29.57■■■□□ 2.32
CERKLQ49MI3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.57■■■□□ 2.32
CERKLQ49MI3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CERKLQ49MI3 AC012354.3-201ENST00000623734 483 ntBASIC29.57■■■□□ 2.32
CERKLQ49MI3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CERKLQ49MI3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CERKLQ49MI3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CERKLQ49MI3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
CERKLQ49MI3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CERKLQ49MI3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.55■■■□□ 2.32
CERKLQ49MI3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.55■■■□□ 2.32
CERKLQ49MI3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CERKLQ49MI3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CERKLQ49MI3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
CERKLQ49MI3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.55■■■□□ 2.32
CERKLQ49MI3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CERKLQ49MI3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
CERKLQ49MI3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.54■■■□□ 2.32
CERKLQ49MI3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.54■■■□□ 2.32
CERKLQ49MI3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CERKLQ49MI3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.53■■■□□ 2.32
CERKLQ49MI3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CERKLQ49MI3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CERKLQ49MI3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CERKLQ49MI3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CERKLQ49MI3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CERKLQ49MI3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CERKLQ49MI3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms