Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Arhgef40Q3UPH7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Arhgef40Q3UPH7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Arhgef40Q3UPH7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Arhgef40Q3UPH7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Arhgef40Q3UPH7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Arhgef40Q3UPH7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
Arhgef40Q3UPH7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC35.02■■■■□ 3.2
Arhgef40Q3UPH7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC35.02■■■■□ 3.2
Arhgef40Q3UPH7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC35.01■■■■□ 3.2
Arhgef40Q3UPH7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC35.01■■■■□ 3.19
Arhgef40Q3UPH7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
Arhgef40Q3UPH7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
Arhgef40Q3UPH7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC34.99■■■■□ 3.19
Arhgef40Q3UPH7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Arhgef40Q3UPH7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Arhgef40Q3UPH7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC34.96■■■■□ 3.19
Arhgef40Q3UPH7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Arhgef40Q3UPH7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Arhgef40Q3UPH7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Arhgef40Q3UPH7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Arhgef40Q3UPH7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Arhgef40Q3UPH7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
Arhgef40Q3UPH7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC34.92■■■■□ 3.18
Arhgef40Q3UPH7 AC153911.1-201ENSMUST00000220378 758 ntBASIC34.92■■■■□ 3.18
Arhgef40Q3UPH7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC34.92■■■■□ 3.18
Arhgef40Q3UPH7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Arhgef40Q3UPH7 Gm37847-201ENSMUST00000192163 1497 ntBASIC34.92■■■■□ 3.18
Arhgef40Q3UPH7 Gm31748-201ENSMUST00000194938 1497 ntBASIC34.92■■■■□ 3.18
Arhgef40Q3UPH7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
Arhgef40Q3UPH7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC34.91■■■■□ 3.18
Arhgef40Q3UPH7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Arhgef40Q3UPH7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Arhgef40Q3UPH7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
Arhgef40Q3UPH7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
Arhgef40Q3UPH7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Arhgef40Q3UPH7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
Arhgef40Q3UPH7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC34.89■■■■□ 3.18
Arhgef40Q3UPH7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Arhgef40Q3UPH7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Arhgef40Q3UPH7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
Arhgef40Q3UPH7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Arhgef40Q3UPH7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
Arhgef40Q3UPH7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
Arhgef40Q3UPH7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC34.87■■■■□ 3.17
Arhgef40Q3UPH7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Arhgef40Q3UPH7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Arhgef40Q3UPH7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Arhgef40Q3UPH7 Gm5812-201ENSMUST00000061073 957 ntBASIC34.87■■■■□ 3.17
Arhgef40Q3UPH7 Terc-201ENSMUST00000082862 423 ntBASIC34.87■■■■□ 3.17
Arhgef40Q3UPH7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
Arhgef40Q3UPH7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Arhgef40Q3UPH7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Arhgef40Q3UPH7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Arhgef40Q3UPH7 Amer2-203ENSMUST00000225247 2662 ntBASIC34.85■■■■□ 3.17
Arhgef40Q3UPH7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
Arhgef40Q3UPH7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC34.84■■■■□ 3.17
Arhgef40Q3UPH7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Arhgef40Q3UPH7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC34.83■■■■□ 3.17
Arhgef40Q3UPH7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC34.83■■■■□ 3.17
Arhgef40Q3UPH7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Arhgef40Q3UPH7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC34.83■■■■□ 3.17
Arhgef40Q3UPH7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Arhgef40Q3UPH7 Gm10420-201ENSMUST00000121713 882 ntBASIC34.81■■■■□ 3.16
Arhgef40Q3UPH7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Arhgef40Q3UPH7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Arhgef40Q3UPH7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Arhgef40Q3UPH7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Arhgef40Q3UPH7 Gm5067-201ENSMUST00000170449 1009 ntBASIC34.77■■■■□ 3.16
Arhgef40Q3UPH7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Arhgef40Q3UPH7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC34.74■■■■□ 3.15
Arhgef40Q3UPH7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Arhgef40Q3UPH7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Arhgef40Q3UPH7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC34.73■■■■□ 3.15
Arhgef40Q3UPH7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Arhgef40Q3UPH7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Arhgef40Q3UPH7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Arhgef40Q3UPH7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
Arhgef40Q3UPH7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Arhgef40Q3UPH7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC34.71■■■■□ 3.15
Arhgef40Q3UPH7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC34.71■■■■□ 3.15
Arhgef40Q3UPH7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Arhgef40Q3UPH7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Arhgef40Q3UPH7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Arhgef40Q3UPH7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC34.71■■■■□ 3.15
Arhgef40Q3UPH7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC34.7■■■■□ 3.14
Arhgef40Q3UPH7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Arhgef40Q3UPH7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC34.68■■■■□ 3.14
Arhgef40Q3UPH7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Arhgef40Q3UPH7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Arhgef40Q3UPH7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
Arhgef40Q3UPH7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC34.64■■■■□ 3.14
Arhgef40Q3UPH7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms