Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chd8Q09XV5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Chd8Q09XV5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chd8Q09XV5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd8Q09XV5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd8Q09XV5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd8Q09XV5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd8Q09XV5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd8Q09XV5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd8Q09XV5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd8Q09XV5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.69■■□□□ 1.06
Chd8Q09XV5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Chd8Q09XV5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.69■■□□□ 1.06
Chd8Q09XV5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd8Q09XV5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.67■■□□□ 1.06
Chd8Q09XV5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd8Q09XV5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chd8Q09XV5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd8Q09XV5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Chd8Q09XV5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.66■■□□□ 1.06
Chd8Q09XV5 Gm8495-201ENSMUST00000188740 694 ntBASIC21.66■■□□□ 1.06
Chd8Q09XV5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Chd8Q09XV5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Chd8Q09XV5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd8Q09XV5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd8Q09XV5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd8Q09XV5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd8Q09XV5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Chd8Q09XV5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd8Q09XV5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Chd8Q09XV5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chd8Q09XV5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chd8Q09XV5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.6■■□□□ 1.05
Chd8Q09XV5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd8Q09XV5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd8Q09XV5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.59■■□□□ 1.05
Chd8Q09XV5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Chd8Q09XV5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Chd8Q09XV5 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.58■■□□□ 1.05
Chd8Q09XV5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chd8Q09XV5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd8Q09XV5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.58■■□□□ 1.04
Chd8Q09XV5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd8Q09XV5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd8Q09XV5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd8Q09XV5 Gm30023-201ENSMUST00000197970 889 ntBASIC21.55■■□□□ 1.04
Chd8Q09XV5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd8Q09XV5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Chd8Q09XV5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.54■■□□□ 1.04
Chd8Q09XV5 Gm9847-201ENSMUST00000052528 599 ntBASIC21.54■■□□□ 1.04
Chd8Q09XV5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd8Q09XV5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd8Q09XV5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chd8Q09XV5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chd8Q09XV5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd8Q09XV5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.52■■□□□ 1.03
Chd8Q09XV5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.51■■□□□ 1.03
Chd8Q09XV5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.51■■□□□ 1.03
Chd8Q09XV5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd8Q09XV5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd8Q09XV5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd8Q09XV5 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.51■■□□□ 1.03
Chd8Q09XV5 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.51■■□□□ 1.03
Chd8Q09XV5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chd8Q09XV5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Chd8Q09XV5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.5■■□□□ 1.03
Chd8Q09XV5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chd8Q09XV5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd8Q09XV5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd8Q09XV5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd8Q09XV5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.49■■□□□ 1.03
Chd8Q09XV5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.48■■□□□ 1.03
Chd8Q09XV5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.48■■□□□ 1.03
Chd8Q09XV5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd8Q09XV5 Gm10232-201ENSMUST00000089221 720 ntBASIC21.47■■□□□ 1.03
Chd8Q09XV5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd8Q09XV5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.47■■□□□ 1.03
Chd8Q09XV5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.46■■□□□ 1.03
Chd8Q09XV5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chd8Q09XV5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Chd8Q09XV5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chd8Q09XV5 Gm9812-201ENSMUST00000061934 968 ntBASIC21.45■■□□□ 1.03
Chd8Q09XV5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chd8Q09XV5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chd8Q09XV5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd8Q09XV5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd8Q09XV5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.44■■□□□ 1.02
Chd8Q09XV5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd8Q09XV5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd8Q09XV5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd8Q09XV5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd8Q09XV5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms