Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm9812-201ENSMUST00000061934 968 ntBASIC17.54■□□□□ 0.4
Hspg2Q05793 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hspg2Q05793 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hspg2Q05793 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hspg2Q05793 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hspg2Q05793 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hspg2Q05793 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.5■□□□□ 0.39
Hspg2Q05793 Gm15820-201ENSMUST00000201566 728 ntBASIC17.5■□□□□ 0.39
Hspg2Q05793 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hspg2Q05793 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hspg2Q05793 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hspg2Q05793 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.49■□□□□ 0.39
Hspg2Q05793 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.49■□□□□ 0.39
Hspg2Q05793 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hspg2Q05793 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hspg2Q05793 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hspg2Q05793 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hspg2Q05793 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Hspg2Q05793 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hspg2Q05793 Serp2-204ENSMUST00000228055 705 ntBASIC17.47■□□□□ 0.39
Hspg2Q05793 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.47■□□□□ 0.39
Hspg2Q05793 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hspg2Q05793 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.47■□□□□ 0.39
Hspg2Q05793 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hspg2Q05793 Amer2-203ENSMUST00000225247 2662 ntBASIC17.46■□□□□ 0.39
Hspg2Q05793 Gm10420-201ENSMUST00000121713 882 ntBASIC17.46■□□□□ 0.39
Hspg2Q05793 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.46■□□□□ 0.39
Hspg2Q05793 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.45■□□□□ 0.38
Hspg2Q05793 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hspg2Q05793 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hspg2Q05793 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hspg2Q05793 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hspg2Q05793 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hspg2Q05793 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.44■□□□□ 0.38
Hspg2Q05793 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.44■□□□□ 0.38
Hspg2Q05793 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.44■□□□□ 0.38
Hspg2Q05793 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hspg2Q05793 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.43■□□□□ 0.38
Hspg2Q05793 Rps24-207ENSMUST00000224568 714 ntBASIC17.43■□□□□ 0.38
Hspg2Q05793 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hspg2Q05793 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hspg2Q05793 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.4■□□□□ 0.38
Hspg2Q05793 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hspg2Q05793 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Hspg2Q05793 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hspg2Q05793 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Hspg2Q05793 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.39■□□□□ 0.37
Hspg2Q05793 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hspg2Q05793 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hspg2Q05793 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Gm45102-201ENSMUST00000207427 857 ntBASIC17.38■□□□□ 0.37
Hspg2Q05793 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.37■□□□□ 0.37
Hspg2Q05793 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
Hspg2Q05793 Gm13238-201ENSMUST00000117655 780 ntBASIC17.37■□□□□ 0.37
Hspg2Q05793 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hspg2Q05793 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hspg2Q05793 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hspg2Q05793 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hspg2Q05793 Gm14117-201ENSMUST00000122417 843 ntBASIC17.36■□□□□ 0.37
Hspg2Q05793 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hspg2Q05793 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hspg2Q05793 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.36■□□□□ 0.37
Hspg2Q05793 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hspg2Q05793 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Hspg2Q05793 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hspg2Q05793 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.35■□□□□ 0.37
Hspg2Q05793 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hspg2Q05793 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.35■□□□□ 0.37
Hspg2Q05793 Zxda-201ENSMUST00000117281 2621 ntBASIC17.35■□□□□ 0.37
Hspg2Q05793 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.35■□□□□ 0.37
Hspg2Q05793 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hspg2Q05793 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.34■□□□□ 0.37
Hspg2Q05793 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hspg2Q05793 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.34■□□□□ 0.37
Hspg2Q05793 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hspg2Q05793 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hspg2Q05793 Gm37136-201ENSMUST00000194368 194 ntBASIC17.34■□□□□ 0.37
Hspg2Q05793 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hspg2Q05793 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.33■□□□□ 0.36
Hspg2Q05793 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hspg2Q05793 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hspg2Q05793 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.33■□□□□ 0.36
Hspg2Q05793 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.32■□□□□ 0.36
Hspg2Q05793 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms